Ectobacillus sp. JY-23: MUG87_08165
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Entry
MUG87_08165 CDS
T09162
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ecto
Ectobacillus sp. JY-23
Pathway
ecto03030
DNA replication
ecto03430
Mismatch repair
ecto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUG87_08165 (holA)
03430 Mismatch repair
MUG87_08165 (holA)
03440 Homologous recombination
MUG87_08165 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecto03032
]
MUG87_08165 (holA)
03400 DNA repair and recombination proteins [BR:
ecto03400
]
MUG87_08165 (holA)
Enzymes [BR:
ecto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUG87_08165 (holA)
DNA replication proteins [BR:
ecto03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUG87_08165 (holA)
DNA repair and recombination proteins [BR:
ecto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUG87_08165 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HTH_37
DUF1002
Motif
Other DBs
NCBI-ProteinID:
UOY94065
LinkDB
All DBs
Position
complement(1565139..1566149)
Genome browser
AA seq
336 aa
AA seq
DB search
MNNIHKKLKRGEFASVYLLYGTEMYFINETLEILLTEALEEQDRELNAVVYDLEDSYLED
VVEDAKTLPFFGERKVIVIKSPLFLTSQKEKIEQNVKVLEEYLQEPSPFTILVFMAPFEK
LDERKKITKLLKTKSEVMEANVMQLADVRKWIHEKVVEHQITMEETAIDQLLELVGSNIM
VLSQEIDKLCLYCEIGGNVTASMVAELVPKSIEQNVFMLVEKVVQRNIGAAMRILDELLV
HQEEPIKILALLAGQFRLLYQVKELQQQGYAQNQIASHIGVHPYRVKLAMKQTNSFSFEQ
LRFITSKLADADYDVKTGKMEKRLVLEFFIMNLNAL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatatacataagaagttaaaaagaggcgagtttgcctctgtttatttactatac
ggcactgaaatgtactttataaatgagacgctggaaatactgcttacagaagcgcttgag
gagcaggatcgggagttgaatgcagtcgtatatgatttagaagattcttatttagaagat
gtagtggaagatgcgaagacattgccgttttttggagagcgtaaagtaattgttataaaa
tcaccgctgtttttaacttcacaaaaagagaaaattgaacaaaatgtgaaggtgcttgag
gaatatctacaagagccatctccctttactattctagtttttatggctccatttgaaaaa
ttggacgagcgtaaaaaaattactaagctcttaaaaacaaaatcagaagtcatggaagct
aacgttatgcaattggcggatgtacggaaatggattcatgaaaaagtggttgaacatcaa
attacgatggaagaaacagctattgatcagctactagagttagtaggaagcaatattatg
gttttatcgcaggaaatagacaaactttgcttgtattgtgaaattggggggaatgtcacg
gcaagtatggttgcggagcttgttcctaaatcaatcgagcaaaacgtattcatgttggtg
gaaaaagtggtgcaacggaatattggcgcagctatgcgcatattggacgagttgcttgta
catcaagaagaaccaattaagattttggcattgcttgcagggcagtttcgtttattatat
caagtaaaggaattgcagcaacagggatatgcacaaaatcaaattgcttctcatattggt
gtccatccgtatcgtgttaagttggcgatgaagcaaacaaattcattttcatttgagcag
ttgcgctttatcacaagcaagcttgctgatgcagattatgatgtgaaaacagggaaaatg
gaaaaacggctggttttagagttttttattatgaacttaaatgctttataa
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