Ectobacillus sp. JY-23: MUG87_08515
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Entry
MUG87_08515 CDS
T09162
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ecto
Ectobacillus sp. JY-23
Pathway
ecto03410
Base excision repair
ecto03430
Mismatch repair
ecto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MUG87_08515 (recJ)
03430 Mismatch repair
MUG87_08515 (recJ)
03440 Homologous recombination
MUG87_08515 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecto03400
]
MUG87_08515 (recJ)
DNA repair and recombination proteins [BR:
ecto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MUG87_08515 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MUG87_08515 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MUG87_08515 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UOY94127
LinkDB
All DBs
Position
complement(1631006..1633345)
Genome browser
AA seq
779 aa
AA seq
DB search
MLQAKTRWRQKTGNEELIESLSHSLGLTPFVTALLVHRGLQTETAITNFLYTEKQDFHDP
FLLQDMKKVTDRIYRAIKEQEPVLIFGDYDADGVSSTTVLYEALQELGAQVEFYIPNRFT
EGYGPNEGAFRWAKEAGFSLIITVDTGISAVKEANLAKELGIDLIITDHHEPPPQLPDAY
AIIHPKLDDYPFKELAGVGVAFKVAHALLGRVPEHLLEIAVIGTIADLVPLHGENRLLAK
RGIEKLRQTKRPGLLALLQVANSNPKEANEETIGFTIGPRINAVGRLEDAAPAVHLLLTE
DIEEAKGLAEEIDALNKQRQEIVKQIAQEAIQEVEELYPPEQNKVLVIAREGWNAGVVGI
VASKLVERFYRPTIILSIDHDKGIAKGSARSIEGFDLFANLSDCRDILPHFGGHPMAAGM
TLQLEDVDELRVRLNKLADIQLMPEDLLPVTEIDVTCQPRDITLSSIAEMSMLAPFGVGN
PKPRLHIEDASLESIRQIGADGSHLKLTMRDEEVRLDGVGFGFGQAAEEISPISKVSIVG
EASINEWNNVKKPQIMIADIAVTDWQLFDWRSMRNVEKHIAMLPKNQVKIVYFRSETLEK
FSVGEYRDHLIPAAKARSHMEGNYIILLDMPPTTKHLQQMFINAFPARIYAVFYQEMQHT
FSTIPTREHFKWYYSFLRQQAPFSIVKHGAQLCAHKGWSKDTVNFMTMVFFELEFVKIKD
GVIFIAHQTQKRDLTESATYREKVNQLQLEKELVYSTYQQLKMWFQHMKDGSAHEEALR
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
ttgttacaagcgaaaacgcggtggcgacaaaagaccggtaacgaggaacttatcgagagt
ctttcgcattctctcggtttaacaccttttgttacggcattgttggtccacagaggatta
caaacagaaactgcaattacaaattttttgtatacagaaaagcaggattttcatgatcct
tttttactacaggacatgaaaaaggtaacagacagaatatacagagctattaaagagcaa
gaacctgttttgatatttggtgactatgatgcagatggtgtaagcagtaccacggtttta
tatgaagccttgcaagagcttggcgcacaggtcgagttttatattcccaatcgctttaca
gaagggtatggaccgaacgaaggtgcctttcgctgggcaaaagaagcaggtttttctctc
atcatcacggtagataccggaatttcggcagtcaaagaggcaaatttggcgaaagaactt
ggaatagatcttatcattacagatcaccatgaaccgccaccacagcttccggatgcatat
gccattatccatccaaagctcgatgattatccatttaaagagctagctggtgtgggtgtg
gcgtttaaggtagcgcatgcgttgttaggacgtgtgccggagcatttactcgaaattgcg
gtgattggtacaattgctgaccttgtgcccctgcacggcgaaaatcgtttgcttgcaaag
cgcgggattgaaaagctacgtcaaacaaaaagaccggggcttcttgcgcttttacaagta
gcaaatagcaacccaaaagaagcaaatgaagaaacgattggttttacaattggtccgcgt
attaacgccgttggacgcctagaagacgctgcgcctgcggttcatttgcttttgacagaa
gatatagaagaagcaaaaggcttagcagaagaaattgacgcattaaataagcaaagacaa
gagattgtcaagcaaattgcacaggaagcaatacaagaggtagaagagctgtatccacct
gagcaaaataaggtgttggtgattgctcgtgagggctggaatgccggggttgtcggcatt
gtagcgtctaagcttgtagagcgcttttatcgaccaaccattatactgagtattgatcat
gacaaaggaattgccaaaggatcggctcgaagtatagaaggctttgatttatttgcaaat
ctttctgattgtcgtgatatccttccgcattttggaggtcatccgatggctgcaggcatg
acgttgcagttagaggatgttgatgaattgcgagttcgccttaataagttggcagacata
caactgatgccggaagatttactgccagttactgaaattgatgtaacgtgtcagccgcgt
gatatcacgctgtcttcgattgcagaaatgtctatgctggcaccattcggagttggaaac
ccaaaaccaagattgcatatagaagatgcgtcattagaaagtatcagacaaattggtgca
gacggttcgcatttaaagcttacaatgcgggatgaagaagtgaggcttgacggtgttggt
tttggatttgggcaggctgcagaggaaatatcgccgatttcaaaagtatcaattgttgga
gaggcgtctataaatgaatggaataacgtaaaaaagccgcaaattatgattgctgatatt
gcagtaacagattggcagttatttgactggcgcagcatgagaaatgtagaaaagcatata
gccatgctgcctaagaatcaagtaaaaattgtttattttcgttcggaaacgcttgaaaag
ttttcggtgggcgaatatagagatcatctgattccggctgctaaagcacggtcacatatg
gaaggaaactatatcattttattggatatgcctcctacaactaagcatttacagcaaatg
tttataaacgcttttcctgcacgtatttatgcggttttttatcaagaaatgcagcatact
ttcagtacaattccaacaagagaacattttaaatggtattattcttttcttcgtcagcaa
gcccctttttcaattgtaaagcatggtgcacagttgtgtgcgcataaaggttggtcaaaa
gatacagtaaattttatgacaatggtgttttttgaattagaatttgttaaaataaaagat
ggtgtgatttttattgctcatcaaacacaaaaacgagatttaacagaatcggcaacgtat
cgcgaaaaagtaaatcaattacaacttgaaaaagaattggtatattccacgtatcaacaa
ttaaaaatgtggtttcaacatatgaaagacggttctgcacatgaggaggcacttaggtaa
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