Ectobacillus sp. JY-23: MUG87_11780
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Entry
MUG87_11780 CDS
T09162
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ecto
Ectobacillus sp. JY-23
Pathway
ecto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUG87_11780 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecto03021
]
MUG87_11780 (rho)
03019 Messenger RNA biogenesis [BR:
ecto03019
]
MUG87_11780 (rho)
Transcription machinery [BR:
ecto03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MUG87_11780 (rho)
Messenger RNA biogenesis [BR:
ecto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MUG87_11780 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_22
AAA
NACHT
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
UOY91235
LinkDB
All DBs
Position
complement(2278569..2279840)
Genome browser
AA seq
423 aa
AA seq
DB search
MNLTISALEGMKLKELYEHAKSFKISYYSKLTKKELIFAILKAQAEKEGFFFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEAV
NGDNPESAKERVHFPALTPLYPDRQMKLETEAKGLSTRIMDLIAPVGFGQRGLIVAPPKA
GKTMLLKEIANSITTNHPEAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKKDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRALAERRIFPAIDIRR
SGTRKEDLLIPKEHLDKLWGIRKAMTDAPDFTDRLLRTLRKTKSNEEFFQIVSKEQKSPV
TMK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaacaatttcagcattagaaggcatgaagttaaaagagctttatgaacatgcg
aagagttttaaaatttcctactacagtaaactaacaaaaaaagagctgatttttgctatt
ttgaaagcgcaagcagaaaaagaaggctttttctttatggaaggcgttttagaaattatt
caatccgagggatttggcttcttacgtccaatcaattactccccaagctctgaagatatt
tatatttccgcatcgcaaatccgcagattcgacttacgtaacggtgataaagtatcaggg
aaggttcgtccgccaaaagaaaatgagcgttactttggtttactgcaggtagaagcagta
aatggcgataatcctgaatcagcgaaggagcgcgttcactttccagcgcttacaccgcta
tatcctgaccgtcagatgaagctggaaacagaagcgaaaggattatcaacgcgtattatg
gatcttatagcaccagtggggtttggtcagcgtggtttaattgtcgcacctccaaaggct
ggtaaaacaatgcttctaaaggaaattgcgaacagcattacaacaaaccatccagaagca
gagcttattgtattgctaattgatgagcggccggaagaagttacagatattgaacgctct
gtagccggtgatgtagtaagttcaacatttgacgaagtaccagaaaaccatattaaagtg
gcagagcttgtgcttgagcgtgcgatgcgtcttgttgaacataaaaaggatgttgtaatc
ttaatggatagtattactcgtttagctcgtgcatataacctggtaattcccccaagtggg
cgcacactatccggtggtattgatccagcagcctttcatcgtccaaaacgcttctttggt
gcagcgcgtaatattgaggaaggtggcagcttaaccattctcgctacggcacttgtcgat
accggctctcgtatggatgacgtcatttatgaggaatttaaaggaacgggtaacatggaa
ttgcatttagatcgcgcacttgcagagcgtcgtatcttcccggcaatcgatattcgccgc
tccggtacgcgtaaagaagatttactcataccaaaagagcatcttgataaactatgggga
attcgcaaggcgatgacggacgcaccagattttacagatcgtctattacgcacattgcgt
aaaacaaaatcaaatgaagaattcttccaaattgtatcaaaagaacaaaaaagcccggtc
acaatgaaatag
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