Ectobacillus sp. JY-23: MUG87_12580
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Entry
MUG87_12580 CDS
T09162
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ecto
Ectobacillus sp. JY-23
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecto03032
]
MUG87_12580 (gyrB)
03400 DNA repair and recombination proteins [BR:
ecto03400
]
MUG87_12580 (gyrB)
Enzymes [BR:
ecto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MUG87_12580 (gyrB)
DNA replication proteins [BR:
ecto03032
]
Prokaryotic type
DNA Topoisomerases
MUG87_12580 (gyrB)
DNA repair and recombination proteins [BR:
ecto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MUG87_12580 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UOY91380
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Position
2451273..2453195
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AA seq
640 aa
AA seq
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MEQKQAQEQTYDESQIQVLEGLEAVRKRPGMYIGSTNAKGLHHLVWEIVDNSIDEALAGY
CTEVNVVIEEDNSITVKDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGL
HGVGASVVNALSSKLDVYVYREGKTHYQEYKRGVPSEDLKVIGEADHTGTTIHFVPDTEI
FTETIEYDYDTLANRLRELAFLNRGIKLTIEDKRENPRKKEFHYEGGIKSYVEHLNRTKE
AIHEEPVYVEGSRDGINVEIALQYNEGYTSNIYSFANNIHTYEGGTHEVGFKTALTRVIN
DYARKNNLIKESDSNLIGEDVREGITAIVSVKHPDPQFEGQTKTKLGNSEARTITESVFS
ETFEKFLLENPSVARKIVEKGLMAARARVAAKKARELTRRKNALEISSLPGKLADCSTKD
PSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEVRAMVTAI
GTGIGGDFDIEKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRQIIEYGYVYIAQPPLY
KIQQGKKVQYAYNNKELEKALSELPAQPKPGIQRYKGLGEMNPGQLWETTMDPEVRTLLQ
VNLQDAIEADETFETLMGDKVEPRRNFIQDNARYVQNLDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaaacaagcgcaagagcagacatatgatgaaagtcaaattcaggttcttgaa
ggcctagaagcagtcagaaagcgtccaggtatgtatataggttctaccaatgctaaaggt
ctacaccatttggtatgggagattgtagataatagtattgatgaggcactcgctggctat
tgtacagaggtcaatgttgttattgaggaagacaatagtattactgttaaagataatggc
cgtggtatccctgtaggtattcatgaaaaaatgggaagacctgctgtagaggttatcatg
acggtccttcatgctggaggaaagtttggtggaggcggttataaagtttccggtggtttg
catggcgtcggtgcatcagttgttaacgctttgtcttctaagttagatgtatacgtatat
cgcgaagggaaaacccattatcaagaatataaacgcggtgtaccttcagaagatcttaag
gttattggtgaagctgatcatacgggcacaactatacattttgtacccgatacagagatc
tttactgagactatagagtatgactacgatacattggcaaatcgccttcgtgagcttgcc
ttcttaaataggggtattaagcttacgattgaagataagcgtgaaaatcctcgtaaaaaa
gaatttcactatgagggcggcattaagtcttatgtagagcaccttaatcgtacaaaagaa
gcaattcatgaagaacctgtatacgttgaaggctctcgtgatggcattaatgttgagatt
gcgttgcagtacaatgaaggatacacaagtaatatttactcctttgctaacaacattcac
acgtatgaaggtggtacacacgaagttggtttcaaaactgccttaactcgtgttattaat
gactacgctagaaagaacaatttaattaaagaaagtgacagcaatttaattggggaagat
gtgcgcgaaggaatcactgcaattgtttctgttaaacatccagatcctcagtttgaaggg
caaacgaaaacaaagctaggtaacagtgaagctcgtactattacagagtctgttttctct
gagacgtttgaaaagtttctacttgaaaatccgtccgttgcaaggaaaattgtagaaaaa
ggtttaatggcagccagagcaagggttgctgcaaagaaggcaagggaacttacccgtagg
aaaaatgcgctggagatttcgagtctaccaggaaagctagctgattgctctacgaaagat
ccgtcaattagcgagttatatattgtagagggcgactctgctggtggttcagcgaaacaa
ggtcgtgatcgtcattttcaagcaattttaccacttcgtggaaagattattaacgtagag
aaggccagattagataagattctatctaataacgaagtacgtgcaatggtgacagcaatt
ggtacaggtattggtggagattttgatattgagaaagctcgttatcataagattattatt
atgaccgatgctgatgtagatggtgctcatatacgtactctattgttaacgttcttctat
cgttatatgcgtcaaattattgaatatggatatgtgtatatcgcacagccacctctttat
aagattcaacaaggaaagaaagttcaatatgcttataacaataaagaacttgaaaaagca
ctttctgaactacctgctcagccaaaaccaggtattcaacggtataaaggtcttggtgag
atgaatccaggacagctttgggaaacaacgatggatcctgaggtgcggacattgcttcaa
gtaaatctacaagatgctattgaagcagatgaaacttttgagacattgatgggagataag
gtagagccgcgcagaaactttatccaagacaatgcaagatacgtgcaaaaccttgatatt
taa
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