Ectobacillus sp. JY-23: MUG87_13360
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Entry
MUG87_13360 CDS
T09162
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ecto
Ectobacillus sp. JY-23
Pathway
ecto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MUG87_13360 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecto03021
]
MUG87_13360 (rpoA)
03400 DNA repair and recombination proteins [BR:
ecto03400
]
MUG87_13360 (rpoA)
Enzymes [BR:
ecto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MUG87_13360 (rpoA)
Transcription machinery [BR:
ecto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MUG87_13360 (rpoA)
DNA repair and recombination proteins [BR:
ecto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MUG87_13360 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UOY91505
LinkDB
All DBs
Position
2589070..2590014
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVELNEGAKYGKFVIEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTTIILNIKKLALKIYSEEEKTLEIDVQGEGVVTAADITHDSDVEI
LNPDLHIATLAKDAHLRMRLTAKRGRGYTPADANKREDQPIGVIPIDSIFTPVSRVTYQV
ENTRVGQVTNFDKLTLDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTNEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
HKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagattgaaaaaccgaaaatcgaaacggttgaacttaacgaaggcgctaaatac
ggtaaattcgttattgaaccacttgagcgtggatatggtactactttgggtaactcctta
cgtcgtattttgttatcttcactccctggtgccgctgttacgtcaatccaaattgatgga
gtacttcatgagttttcaacaattgagggcgttgtagaagatgttacaacgattatctta
aacatcaagaaattggcgcttaagatttactctgaagaggagaaaacgcttgaaattgat
gtgcagggtgaaggtgttgtcacagctgccgatattactcatgatagcgatgtcgaaatc
ttaaatccggatttacacattgcaacgttagcaaaggatgcgcatttacgcatgcgttta
actgcaaagcgtggtcgtgggtatacgccagctgatgcaaacaaaagagaagatcaacca
ataggcgtaattcctattgattccattttcactccagtgtcacgtgtaacgtaccaagtg
gaaaatacacgtgtagggcaagtaacgaactttgacaaattgacgctagatgtatggacg
gatggaagcatcgggccgaaagaagcaatttcgttaggcgctaagatcttaaccgagcat
ttaaatatctttgttggtttaactaacgaagcgcaaaatgctgagattatggtagaaaaa
gaagaagatcaaaaagaaaaagttttagaaatgacaattgaagaactggatctttctgtt
cgttcttataactgcttaaagcgagctggtatcaatacggtacaagagcttgctaacaaa
acagaagaagatatgatgaaagttcgtaacttaggacgtaaatccttagaggaagtaaag
cataagcttgaagaactaggcttaggcttacgtaaggacgactaa
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