Ectobacillus sp. JY-23: MUG87_13670
Help
Entry
MUG87_13670 CDS
T09162
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ecto
Ectobacillus sp. JY-23
Pathway
ecto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUG87_13670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecto03019
]
MUG87_13670
03009 Ribosome biogenesis [BR:
ecto03009
]
MUG87_13670
Enzymes [BR:
ecto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUG87_13670
Messenger RNA biogenesis [BR:
ecto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUG87_13670
Ribosome biogenesis [BR:
ecto03009
]
Prokaryotic type
rRNA helicases
MUG87_13670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
DD_DDX21-DDX50
NAT10_TcmA_helicase
CMS1
Motif
Other DBs
NCBI-ProteinID:
UOY91554
LinkDB
All DBs
Position
2649739..2651247
Genome browser
AA seq
502 aa
AA seq
DB search
MTTFRELGLDEQLLNSVEKMGFEEATPIQAQTIPVALEGHDIIGQAQTGTGKTAAFGLPL
IQKVNTKNDSIQGIVIAPTRELAIQVSEELYKIGYHKRVRILPIYGGQDINRQIRALKKN
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPEEHQTLL
FSATMPDPIRRIAERFMQDPKHIKVKAKEVTMPNIQQFYIEMQEKKKFDILTRLLDIQSP
ELAIIFGRTKRRVDELSEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGSIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGLAMLFVTPREIGQLKNIERTTN
RKIDRMKPPTLDEALEKQQRLIAEKLSSIIEAGENLSYYKRMAEELLEEHESVELVAAAL
KAMTKEPDSTPIKLTDEPPVVTRDRNRGRSDRNRSRGGERDRDRDRNRNRKGGPRKEYGG
QRSRSENRGDNRGRSRKPSATN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttagagaactaggattagatgaacagcttctaaactctgtagaaaagatg
gggtttgaagaagcgacgcctattcaggcacaaacaatccctgttgcgttagaaggacat
gacattattggccaagcgcaaacaggtacgggtaaaacagctgcgttcggtctgccgtta
attcaaaaagtaaacacaaagaatgacagcattcaaggtatcgttattgcaccaactcgt
gaacttgcaattcaagtatctgaagagttatacaaaatcggttaccataagcgcgtgcgc
attttaccaatttacggcggacaagacatcaaccgtcaaattcgtgcattaaagaaaaac
ccgcatattattgtaggtacaccaggtcgtattcttgaccatatcaaccgtaaaacattg
cgccttcaaaatgttgaaacagttgtactggacgaggcagatgaaatgctaaacatgggc
ttcattgaagacattgaagctattctaacagatgtgcctgaagagcatcaaacattattg
ttctccgctacaatgcctgacccgattcgtcgcatcgcggagcgcttcatgcaagatcca
aagcacattaaagtaaaagcaaaagaagtaacaatgccgaacattcaacagttctacatc
gaaatgcaagagaagaaaaagtttgatatcttgactcgtctattagatattcaatctcct
gagcttgcgattattttcggtcgtacaaagcgtcgcgttgatgaattgtccgaagcatta
aaccttcgcggctatgcggcagaggggattcacggtgacttatcacaagcaaaacgtctt
tctgttctgagaaagttcaaagaaggctctattgaagttcttgttgcgacagacgtagca
gcgcgtggtctagatatttctggcgttacacacgtatataacttcgatattccacaagat
cctgaatcttatgttcaccgtattggccgtacaggtcgtgcaggtaaaacaggtttggcg
atgttattcgtaacaccgcgtgaaatcggtcaattgaaaaacattgagcgtacaacaaac
cgcaagattgatcgtatgaagccgccaactttggatgaggcgttagaaaagcagcagcgt
ttaattgccgaaaagctatcaagcatcattgaagcaggcgaaaatttgtcttactacaaa
cgtatggcagaagagctgttagaagagcatgagtctgtagagctagtagcagcagcacta
aaagcaatgacaaaagagccggatagcactcctattaagcttacagatgagccaccggtt
gttacaagagaccgcaatcgtggtagaagcgaccgcaatcgcagccgcggtggagagcgt
gaccgtgatcgcgatcgcaaccgtaaccgtaaaggtggtcctcgtaaagagtacggcggt
caaagaagccgcagtgaaaaccgcggtgataaccgtggtcgtagccgtaaaccatctgcg
acaaactaa
DBGET
integrated database retrieval system
