Ectobacillus sp. JY-23: MUG87_14265
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Entry
MUG87_14265 CDS
T09162
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ecto
Ectobacillus sp. JY-23
Pathway
ecto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUG87_14265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecto03019
]
MUG87_14265
03009 Ribosome biogenesis [BR:
ecto03009
]
MUG87_14265
Enzymes [BR:
ecto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUG87_14265
Messenger RNA biogenesis [BR:
ecto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUG87_14265
Ribosome biogenesis [BR:
ecto03009
]
Prokaryotic type
rRNA helicases
MUG87_14265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SporV_AA
Motif
Other DBs
NCBI-ProteinID:
UOY91648
LinkDB
All DBs
Position
2771864..2773096
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AA seq
410 aa
AA seq
DB search
MKDFASLTIHEDLQKRLQRNGLSTPTPVQEKTIPLLLAGKDVVAQAQTGTGKTLAFVLPI
LQNINPDLPHIQALIVAPTRELAVQITGEIEKLRTPDVHVLAVYGGQDVERQIKKLAGAT
HIVVGTPGRLLDHMRRTTIDVSGISTLVLDEADQMLHIGFLPEVETIIEKTSPDRQTALF
SATMPGEIRALAKRYMKKPENVQIKTSQITVKDIRQIAVETTDRTKQASLRDMLEREQPF
LAMIFCRTKRRASTLNAALQEHGYNSDELHGDLSQAKREKVMERFRQAKLQYLVATDVAA
RGLDVEGVTHVFNYDIPQDVESYIHRIGRTGRAGESGLAVTFFAPKDKQYLEMIEKGIKM
QMERIERPKTEEVQADRQNREPRGKKPAFKQGGRKPAHAQAKSSQGRRKR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggactttgcaagtcttaccatacatgaagatttacagaaaagattacagcgtaat
ggattaagtacccctacaccagtacaggaaaagacgattccgttactgcttgcgggcaaa
gatgtggttgcacaggcgcaaacaggaacgggaaaaacattagcatttgtgttgccgatt
ctacaaaacataaatccagatttaccgcatattcaagcgcttattgttgcacccacacga
gagctagctgtacaaattacaggtgaaatagaaaagctgcgcacaccggatgttcacgtg
cttgccgtttatggcggtcaggatgtagagaggcaaattaagaagttggcaggtgcaacg
catatcgttgttggaacaccgggccgtcttcttgatcatatgcgccgcacaacgattgat
gtgtcaggtatttcaacgctcgtactagacgaggcagaccagatgctgcatattggattt
ttgccggaagtagaaacgattattgaaaaaacatctccagacagacaaacagctttattc
tccgcaaccatgccgggagaaattcgtgcgctagcaaagcggtatatgaaaaagcctgaa
aatgtccaaatcaaaacttcgcaaattacggtaaaggatatccgtcaaattgctgtagaa
acaacagaccgcacgaagcaagcttctttacgcgatatgcttgagcgggagcagccattt
ctggcgatgattttctgccgaacaaagcgccgcgcaagcacactgaacgcagcactgcag
gagcacggctataactccgatgaattgcatggcgatttatcacaagcaaagcgtgaaaag
gttatggagcgttttcgtcaggcaaagctacaatatttagtggctaccgatgttgcagca
cgcggccttgatgtagaaggtgtgactcacgttttcaactacgatattccgcaggacgta
gagagttatatccaccgcatcggacgaacaggccgtgcaggggaaagtggattggctgtt
acgtttttcgcaccaaaggataaacagtatttagaaatgattgaaaaaggaattaaaatg
cagatggagcgcattgagcgcccgaaaacagaagaggtacaagcagacagacagaatcgg
gagccgcgaggcaaaaagccggcatttaaacaaggcggccgaaagccagcacatgcgcag
gcaaaaagcagtcaagggcgccgaaagaggtaa
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