Ectobacillus sp. JY-23: MUG87_16830
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Entry
MUG87_16830 CDS
T09162
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ecto
Ectobacillus sp. JY-23
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecto03400
]
MUG87_16830 (addB)
Enzymes [BR:
ecto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUG87_16830 (addB)
DNA repair and recombination proteins [BR:
ecto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MUG87_16830 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
DEAD
AAA_22
AAA_30
AAA_16
VHL_C
Motif
Other DBs
NCBI-ProteinID:
UOY92083
LinkDB
All DBs
Position
3334006..3337452
Genome browser
AA seq
1148 aa
AA seq
DB search
MSLRIVLGRAGTGKSALCLREMHEELNQRPKGESIIYLVPEQMSFQAQQALGSSIRAQVF
SFSRLAWKVLQETGGASRLHIDEAGVNMLLRKIVEGRKGELRVFQKAAKQNGFFEQLGGM
IAELKRHNVTPADMYGVWQEAEAKHAPLLASKIHDLQLLYEDFERALIGKYLDSEDYIKL
LAEKLPQSSYMKDAIIYADGFHTFLPQELNVLKRMLQHGAKLTVTLVLDAPQKQELDLFY
TTARTYERLMKIAADLRIEANSIVLEEQHRFKGSASLAHIEKYFESIPPKYFAGNSNLTI
YTAANRQAEVEGVAREIRRLVREEDYRYRDIAVMLRNGASYDDSIKSLFTANEIPFFIDE
KRLMLHHPVVELIRSALEVIEGNWRYEAVFRCIKTELLFPRRSHLLKLREEMDAFENYCL
AYGMQGKKWTNGERWVYRRYRSLETTLQTDNERETEERMNNLRDIVVKPIFTLQKRLKRA
KSVRKMCEAIYLFLEELRVPRKLEAMRKKAEQEGNLLFANDHEQVWHAVIDLLDKYVEML
GDENMSLQLFIEVMSTGLASLRFANIPPSLDQVLIANIDRSRLANVRALFLIGANEGVIP
GLPADEGMLSDEERETLLGSGIELASTTRQKMLEEQFIVYQALTRASHRLYISCPFADEE
GKVLLPSGLFKKLKALVPSAEQEFLTNEVQEGKVEYITTPAMTLSHLVQQLQFWKQSGYK
TDLSFWWDVYNFYVQSPQWHEHSKRVLSSLFYRNEAKPLHKSVSSALYGETIKGSVSRME
LFQRCSYAHFAQHGLALRERDIFKIDAPDIGELFHAALKSIADRLTQQSRSWADLSRAEC
EHLAMEAMEVLAPLLQKEILLSSNRHHYLKHKLQQIIFRASLILSEHAKSSGFVPVDLEV
PFGIGADALPPLHFQLANGTKMEVVGRIDRVDMAEGEQGTFLRIIDYKSSAKSLDMTEVY
YGLALQMLTYLDVVIENAGKWVKDKQATPAGVLYFHVHNPVVEIKGDATDADIDREILRK
FKMKGLLLGDTEVVRLMDASLTSGSSDIVSAGLKKDGTFSAYSSVASEQEFHTLKQYVRR
TFQDIGTSITEGVIDIAPYKLKTKVACGFCQFKSVCQFDESLQENEYRILRPLKEAEALM
KMREEGER
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgcgtattgtattgggacgagctggaactggtaaaagtgccctatgcctacga
gaaatgcatgaggagctcaatcaaagaccaaaaggggaaagtattatttacttagtacct
gaacaaatgtcattccaggcgcagcaggcactagggagttctatccgagcacaggtattc
agcttttcacgacttgcttggaaggtgcttcaggagaccggtggagcaagcaggcttcat
attgatgaagcgggtgtaaatatgcttcttcgtaaaattgtggaaggccgtaaaggtgag
ctgcgtgtctttcaaaaagccgcaaagcaaaatggcttttttgaacagcttggcggcatg
attgctgaattgaaacgccataatgtaacaccggcagatatgtatggggtatggcaagaa
gctgaagctaagcatgctccacttcttgccagcaaaatacacgatctacagctgttatat
gaagattttgaacgtgcccttatcggaaaatatttagactctgaggattatattaagctt
cttgctgaaaagcttccacaatcttcttacatgaaagatgcaattatatatgcggacggc
tttcatacattcttaccacaggagctcaatgtgttaaagcggatgttacaacatggcgcc
aaacttacggttacactcgtacttgatgcgccgcaaaagcaggagctggacttattttac
acaacagcgcgcacatatgaacggcttatgaaaatagcagccgatttacgaattgaggcc
aacagcattgtgctggaggagcaacaccgtttcaaaggaagtgcgtcgcttgctcatatc
gagaaatattttgaatctattccgccgaaatattttgctgggaacagtaatttaacaatt
tatactgctgcaaaccgacaagctgaggttgaaggtgtcgcgcgggaaatccgaagactt
gtaagagaagaagattaccgttatcgtgatatcgccgtgatgttgcggaacggcgcaagt
tatgatgacagcataaaatcgctttttacagcaaatgaaatcccgtttttcattgatgaa
aaacgcttgatgttacaccatcccgtagtagaactaattcgttctgcactggaggtgatc
gaggggaattggcgctatgaagcggtctttcgctgtatcaaaaccgaactgttgtttcct
cgtcgctctcatttgttaaagcttagagaagaaatggatgcgtttgagaattattgtctt
gcttatggtatgcaaggtaaaaagtggacaaatggtgagagatgggtgtataggcgctac
cgttctttagagacaacattgcaaaccgataatgaacgcgagacagaagagcgtatgaat
aacttacgggatatagtagtaaaacctatttttacgctgcaaaagcggttgaagcgtgca
aaatctgtacgcaagatgtgtgaagctatatatttatttttggaagagcttcgtgtgcca
agaaagctagaggcaatgcgaaagaaagcagaacaagaaggaaacttgctgtttgctaat
gaccatgaacaagtatggcatgctgtgattgacttgttggataaatatgtagaaatgctt
ggtgatgagaatatgtcactgcagcttttcattgaagtgatgtctacaggtcttgcttca
ttgcgctttgccaacattcctccttctcttgatcaagtattaattgctaatatagaccgt
tctcgcttggcaaatgtgcgtgcactatttttaattggcgcgaatgaaggtgtaatccct
ggtttgcctgcagatgaaggaatgttatctgacgaggaacgagagaccttgctgggcagt
ggtatagagctcgcttcaacaacacggcaaaagatgttagaagaacaatttattgtgtat
caggcgttaacacgagcatctcatcgtttatatataagctgtccattcgcggatgaggaa
gggaaagtattgctaccatcggggcttttcaaaaagctaaaagcacttgtcccaagcgct
gaacaagagtttctaacgaatgaggtacaagaggggaaagtagaatatattacaacccct
gcgatgacgctttcgcatttggtacagcagttgcagttttggaagcaaagcggttataag
accgacttgtctttttggtgggatgtatataatttttatgtacaatcgccgcagtggcac
gagcatagcaaacgtgtgctctccagtttgttttatcggaacgaagcaaagccacttcat
aaatccgtaagctcggctctttatggagaaacgattaaaggcagtgtttcacgtatggag
ctgtttcagcgttgttcatatgctcactttgcacagcatgggctggcgcttcgagaacgt
gacatttttaaaattgatgcccctgatattggagagctttttcatgccgcgctcaaaagt
attgctgatcgtttaacgcagcaaagcaggagttgggctgatttgagccgggcagaatgt
gaacatttagcgatggaagccatggaggtgctggcgccacttttgcaaaaggaaatttta
ttaagctcgaatcgccatcattatttaaagcacaagctgcagcaaattattttccgtgct
tctcttatacttagtgagcatgcgaagtcgagcggctttgtgccggtggatcttgaggtg
ccgtttggtattggagctgatgcattgccgccgcttcattttcaactggcaaacggtacg
aaaatggaggttgtcggtcgcattgaccgtgttgatatggcagagggagagcaaggaacg
ttcctacgcattattgattataaatcaagcgccaaatcactcgacatgactgaggtgtat
tatggactagcgctacaaatgcttacctatttggatgttgttattgaaaatgccgggaaa
tgggtgaaggataagcaggctacaccggcgggagtactgtattttcatgtgcataatcca
gtcgtggagattaagggtgatgcaacggatgcagacattgacagagaaattttacgcaag
tttaagatgaaaggtttattactgggggatacagaggttgttcgtttgatggatgcctca
ttaacgtcaggttcttcggatattgtatctgcaggattaaaaaaggatgggaccttcagt
gcttattcatccgttgcaagcgagcaggagtttcatacattaaaacaatatgtacgacgc
acgtttcaagatattggaacaagcattacagaaggagtcattgacattgcaccgtacaag
ctgaagacgaaagtggcctgcggcttttgtcagtttaaatcagtttgtcaatttgatgaa
tcattgcaggaaaatgagtaccgcatactgcgtcctctaaaagaggcggaagcgctaatg
aaaatgagagaggagggagaacgatga
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