Encephalitozoon cuniculi: ECU01_1230
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Entry
ECU01_1230 CDS
T00105
Name
(RefSeq) AAA family ATPase CDC48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ecu
Encephalitozoon cuniculi
Pathway
ecu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
ECU01_1230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecu03019
]
ECU01_1230
03009 Ribosome biogenesis [BR:
ecu03009
]
ECU01_1230
04131 Membrane trafficking [BR:
ecu04131
]
ECU01_1230
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecu04147
]
ECU01_1230
Messenger RNA biogenesis [BR:
ecu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
ECU01_1230
Ribosome biogenesis [BR:
ecu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
ECU01_1230
Membrane trafficking [BR:
ecu04131
]
SNARE
SNARE associated proteins
Others
ECU01_1230
Autophagy
Aggrephagy
Other aggrephagy associated proteins
ECU01_1230
Exosome [BR:
ecu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ECU01_1230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_2
AAA_14
AAA_33
TIP49
nSTAND3
RNA_helicase
AAA_28
Mg_chelatase
Parvo_NS1
IstB_IS21
AAA_25
AAA_17
NPHP3_N
AAA_7
DUF815
AAA_18
ResIII
ABC_tran
AAA_24
CDC48_N
ATPase_2
Sigma54_activ_2
Sigma54_activat
TsaE
Vps4_C
Bac_DnaA
NB-ARC
NACHT
SLFN-g3_helicase
Zeta_toxin
DUF5906
Viral_helicase1
AAA_lid_PRS2_C
bpMoxR
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
860302
NCBI-ProteinID:
NP_001402211
LinkDB
All DBs
Position
I:complement(146522..148864)
Genome browser
AA seq
780 aa
AA seq
DB search
MAAAANEKDFSTAILESKTKNTLIVCDKDCSKLRTYQVGLHPTTLNELELFESDYVRILG
KKKAELIFSTVALESVPPRHIAIVRDGRFNLRIRITDTVKLYRVDKDIPVVSKLNFLPIK
DTVENIRGNIFDEFVRPFLDFNFMPLTTGSIYGVTSGLGRVEFKVTKMIDAQDMEIKHGS
VTSTTSVYCDETISREEVEKEFNMVGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVK
PPKGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKN
SPAIIFIDEIDALAPKREKSQGEVERRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPA
LRRYGRFDREIEIGVPDETGRLEILRIHTKNMKMSEDVDLVAINKELHGFTGSDLASLCS
EAALQQIREKLPQIDLDSEKIDAKVLASLKVNSENFRYAIEHTDPSSLRETVIQSPNVKW
SDIGGLEQVKQELRETVQYPVEYPEKFIKFGMTPAKGVLFYGPPGCGKTLLAKAVATECK
ANFISIKGPELLSMWVGESESNIRDLFARARGAAPCVLFFDEIDSIAKARSGNDGSSGAT
DRMLNQLLSEMDGINQKKNVFVIGATNRPDQLDSALMRPGRLDQLVYIPLPDLDSRVSIL
QATLKKTPLSPEIDLRQLAEATDKFSGADLSEICQRACKLAIRETIEYELEQKKKGSEMM
DLEDPVPYLRPDHLVQSLKTARRSVSEKEVERYEAFARSMKVDVRKFDKKNDINDDGLYE
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgcaaacgagaaggacttttcgacagccattcttgagtcgaagacaaag
aatacgcttatagtctgcgacaaggactgcagtaagctccggacataccaggtgggcctt
caccccacaaccctcaacgagctggagctctttgagtctgactatgtcaggatactggga
aagaaaaaggcggagctgatcttcagcacggttgcgctcgaaagcgtcccccccaggcac
attgcaattgttagggacggaagattcaacctgaggataaggatcacggacactgtgaag
ctatacagagtggacaaggacattccggtggttagcaagcttaacttccttccgataaag
gatacggttgagaatatcaggggaaacattttcgacgagtttgtcaggccgtttctggat
ttcaacttcatgccccttacgacggggtcgatttacggagtcacctctgggcttgggagg
gttgagttcaaggttaccaagatgatagatgcacaggacatggagattaagcatgggtct
gtgacgtcgacaacctctgtatactgcgacgagacgatttcaagggaggaggttgaaaag
gagttcaacatggtcggatatgacgatgttggaggatgcagggcacagatggcgaagatc
agggagctggttgagcttccgctgaggcactcccagctatactcaaagataggggtgaag
ccgccgaaggggattctgctgtacggacctcctggaacaggaaagaccttgatagcaagg
gcgatagcaaacgagactggggcctttctgtttttgattaacgggcctgaaatcatgtcg
aagatggcgggcgagagcgagtcgaacctaagaaaggcctttgaagaggcagagaagaac
tcccctgcaataatcttcattgacgagattgacgcgcttgcacctaaaagagagaaatcc
caaggtgaagttgaaagaaggattgtgagccagctgttgaccctcatggacgggatgaag
gcaaggagcaacgtgatagttctcggggccacgaacaggcccaactccattgaccctgca
ctcaggagatatgggagattcgacagggagattgagattggggttcccgatgagaccgga
aggcttgagattttgaggatccacaccaagaacatgaagatgtcggaggatgtggacctg
gtggcgataaacaaggagctgcatgggtttactgggagtgacctggcatcgctatgcagt
gaagcggcactacagcagatcagagaaaagcttccgcagatagatctagacagcgagaag
attgatgccaaggtcctagcctcgctgaaagttaacagtgagaacttcaggtatgcaatc
gagcacacggacccaagttctcttagggaaacagttatccaatctccaaatgtcaagtgg
tcggatatcggggggcttgagcaggttaagcaggagctgagggaaactgtgcagtatcct
gtggagtatcctgagaagttcataaagtttggaatgacgcctgctaagggtgtcttgttc
tacgggcctccgggatgtggtaagacacttcttgccaaggctgttgctacggaatgcaag
gccaacttcatatccataaagggcccggagctcctttcgatgtgggttggagagtctgag
tcgaacatcagagacctgtttgcacgggcaaggggggcagcaccttgcgttctgttcttt
gatgagatagattcgattgccaaggcaaggtctgggaatgatgggagtagtggggccact
gatagaatgctgaaccagctgctatctgagatggatgggataaaccagaagaagaatgtg
tttgtgatcggggcaacaaacaggcctgaccagttggatagtgctttgatgaggccagga
aggcttgaccagctggtttacatcccactgcccgatctcgacagcagagtatccatcctg
caggccacactcaagaagacacccctctctcctgagatcgatcttcgacagcttgcagag
gccacggacaagttctctggggccgatctttcggagatatgccagagggcgtgcaaactg
gcgataagagaaacgatcgagtatgagcttgagcagaagaaaaagggctctgagatgatg
gatctcgaggaccccgttccctaccttcgtcccgatcatctagttcaatccttgaagact
gcaagacgcagtgtgtctgagaaggaggtcgagcggtacgaggcgtttgcaaggtcgatg
aaagttgatgtaagaaagttcgacaagaaaaatgacatcaacgatgatgggctctacgaa
taa
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