Encephalitozoon cuniculi: ECU03_0290 Help Entry ECU03_0290        CDS       T00105                                  Name (RefSeq) uncharacterized protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism ecu  Encephalitozoon cuniculi Pathway ecu03020   RNA polymerase ecu03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:ecu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     ECU03_0290   09124 Replication and repair    03420 Nucleotide excision repair     ECU03_0290  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ecu03021]     ECU03_0290    03400 DNA repair and recombination proteins [BR:ecu03400]     ECU03_0290 Enzymes [BR:ecu01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      ECU03_0290 Transcription machinery [BR:ecu03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      ECU03_0290 DNA repair and recombination proteins [BR:ecu03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       ECU03_0290 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_7 RNA_pol_Rpb1_6 RNA_pol_Rpb1_R UPF0228 Motif Other DBs NCBI-GeneID:  858702 NCBI-ProteinID:  NP_597540 UniProt:  Q8SSC4 LinkDB All DBs Position III:complement(33938..38737) Genome browser AA seq 1599 aa AA seqDB search MFEAKVKKQIKSIQFGLFSPDEVRNGSVALIVHPEVMEGGVPKTGGLIDLRMGTTDRMYL CQSCGGDNFSCPGHFGHIELTKPMFHVGYISKIKKVLECVCFYCSKIKIPRKGIKSTLSN VWGMSKGRSVCEGEVLDNGRSGCGNKQPVIKREGLTLVAFMKGEESNEGKVMLNGERVYS IFKKISDEDSVYMGFDLKYSRPEWMILTVLLVPPPAVRPSIVMEGSLRGEDDLTHKLADI IKSNGYLKKYEQEGAPGHIVRDYEQLLQFHVATFIDNDIGGLPQALQKSGRPLKSLSARL KGKEGRIRGNLMGKRVDFSARTVITPDPNISLEEVGVPLEIAKIHTFPEKVTSFNIDRLE KLVRAGPNEHPGANYVLRSDGQKIDLNFNRSDIRLEEGYVVERHMQSGDVVLFNRQPSLH KMSMMAHYARVMGNKTFRLNLSVTSPYNADFDGDEMNLHMPQSYTSKAELEELALVSRQI ISPQSNKPVMGIVQDTLTGLRLFTLRDTFLNEREVMSLLYAVNLEFCDIPLGDAVQTGLR KGKDYDIMKILRKPAIAKPMRLWTGKQVLSFVLPNLNYIGLSSEHDDDDKENIGDTRVII QDGYIHSGVIDKKAAGATQGGLVHIIFNDFGPKRAAQFFDGVQRMINAFMTGIHTFSMGI GDTIADPKTVKVVESAIRKAKEEVSALIENARQNRLERLPGMTMKESFESHLNLVLNRAR DVSGTSAQRSLSENNNMKTMVLAGSKGSFINISQVTACVGQQNVEGKRIPFGFSHRTLPH FVKDDYTGKSRGFVENSYLTGLDPEEFFFHAMGGREGLIDTAIKTAETGYIQRRLVKALE DAIVRQDESVRSGNGLVYQIKYGEDGFDATFLESQKVDVKNFTKRYYIDMFGTEELEIKH GQVSEEVYGMLSSDVDLQKLLDQEYEWLVGEIFEGPPILSVGEVDIERDYKVRDIYQSAV MSPCNFTRILATAKRTFHLSTGDVSPYYILEAHKHLTTSNRILNVLIRTNLSVKRVLLEH RLNTEAFNWVVEVIDAKILKAKITPNEMVGTLAAQSVGEPATQMTLNTFHLAGVASTVTM GVPRLKEIFNVTKNLKTPSMKIYLDREHGKSIEAAKTIQNEIECLTVKDLCLFSEIYYDP EITGTEISDDKDFVEAYFEFPDEDVDFSCLSPFLMRLVVDRAKLVGRGINLEYVAMFIRK ELGGGAHVICSDENAVNMVVRVRTTKSEDESLNFYTTALNSLLRLQLGGYKNVKKVYISE DKDRKEWYLQTDGICLSQILGNPAVNSRLTISNDLVEIAETLGIEAARESILRELTIVID GNGSYVNYRHMSLLADVMTMRGYLCGITRHGVNKVGAGALKRSSFEETVEILLDAALVSE KNICRGITENIMMGQLAPMGTGNIEIMLDMKKLDKAIPLSNPVFKPNEPATPVISTPSSD SFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT SPSYSPTSPSYSVSMSSFSNKNKSKNQDGDKKRRNDGSF NT seq 4800 nt NT seq  +upstreamnt  +downstreamnt atgtttgaggcgaaagtaaagaagcagatcaagtcgatacagttcgggttgttttcacca gatgaggtgagaaatggaagtgttgctttgatcgtgcacccggaggtcatggaaggtggg gttccaaagaccgggggtctgattgatctgaggatgggaacgaccgacagaatgtatctc tgccaaagctgcggaggagataacttctcgtgtccagggcactttgggcatatcgaactt acaaagcctatgttccatgttggatacatctccaagattaagaaggttctggaatgtgtt tgtttctattgttccaaaattaagattccaaggaaggggataaagtcgacgctgagcaat gtatggggcatgagtaagggccggtctgtgtgcgagggagaggttctcgacaacggaaga agcggatgcggaaacaagcagcctgtgataaagagggagggcctgactcttgttgccttt atgaaaggagaagaaagcaacgagggaaaggtcatgctgaatggggaaagggtctatagt atatttaagaagataagcgacgaggacagtgtgtacatggggtttgaccttaagtacagc aggcctgaatggatgatactcactgtgttgcttgttccgccacctgcagtacggccttcg attgtcatggagggctcactgcgtggagaagacgatctcacgcacaagctggcagacatt ataaagtcgaatggatatctgaagaagtatgagcaggaaggggcgccagggcacattgtt cgagattacgagcagttgctgcagttccatgttgcgacatttatagacaacgacatcggc gggttgcctcaggcgctgcagaagagtggaaggccgctgaagtcgctgtctgccaggctg aagggtaaggaaggaaggatccgagggaaccttatggggaagagggtggacttcagtgca agaacagtgataacgccagacccaaacatatccctggaggaggtaggggttcctcttgag attgcaaagatccatacatttcccgaaaaggttacatcgttcaacatagatagactggaa aagcttgtgagggcagggcctaacgagcatccgggggccaactatgtgctcaggtctgat gggcagaagatagacctgaactttaacaggagcgatatacggctggaggaggggtatgtt gtggagagacacatgcagtctggagatgttgttcttttcaatagacagccctcccttcac aaaatgtcgatgatggcgcactatgccagggtgatgggcaacaaaacattccgactgaat ctcagtgttacttctccttacaatgcagacttcgatggagacgagatgaatcttcacatg cctcaaagctacacatccaaggcagagctggaggagctggcgcttgtatccagacagatt atttcgcctcagtctaacaagcctgttatgggtattgtgcaggatacacttacgggcctg aggctgtttaccttgcgagacacgtttctaaatgagagggaggttatgtcgctgttgtat gcagtgaatttggagttctgcgacattcctctgggagatgcagtgcagacagggctccgg aagggaaaggactacgatatcatgaaaatattgagaaaacccgccatagcaaagcctatg aggctgtggacaggaaagcaggtactaagctttgttcttccgaatctgaactacatcggg ctttcttcggagcacgacgatgatgataaagagaatatcggcgacaccagggttatcatc caggatggatacattcattccggggtgattgacaaaaaggcggctggagcaacccaagga gggctagtacacataattttcaacgactttgggcccaaaagagctgcacagttttttgat ggggtgcagagaatgatcaacgcctttatgactggaatccataccttttcgatgggaata ggcgacacgattgcagatcccaagacggtgaaggtggttgagtctgcgatcagaaaagca aaggaagaggtgtctgctctcattgagaatgcgcggcagaaccgccttgaaagacttccc ggaatgacgatgaaggaaagttttgagagccatctaaacctggtgttgaatagggcaaga gacgtgagcgggacaagtgcacagagaagcctcagtgaaaacaataacatgaagacaatg gttcttgcaggatcgaagggatcgtttattaacatttcacaggtgactgcctgtgtgggg cagcagaatgttgagggaaagcgcattccctttggattctcgcaccgaacacttccacac tttgtaaaagacgattacactggcaagagcagaggatttgttgagaacagctatttgacg gggttagacccggaagagtttttcttccatgcaatgggaggaagagaggggcttatagac acagcgattaaaacggcagagactgggtatatccagagaaggctggtgaaagcccttgaa gatgccattgtgaggcaagatgagagtgtccgaagcggaaatggcctggtataccagatc aagtacggggaggatgggtttgatgccaccttcctagaatctcaaaaggtcgatgtaaag aacttcacaaagagatattacatcgatatgtttggtaccgaggaactggaaattaagcat ggacaagtttcagaggaggtttatggaatgctctcatcggacgtcgatctccaaaagctc ctggaccaggaatacgaatggctggttggggagatatttgaaggccctccaatactctca gtgggagaagttgatatagagcgcgactacaaggtcagggatatttaccagagcgcagtg atgagtccttgtaacttcacccgtatcttagccactgcaaaaaggacatttcatctttcc acaggcgatgtttctccttattacatacttgaagctcataagcatcttacaacatccaac aggatcctaaatgtactcataaggactaatctgagtgtaaaaagggttcttcttgagcat aggctgaatacagaggcatttaattgggttgtggaagtgatagatgcaaagattctgaag gccaaaataacgccgaatgaaatggtggggacgctggcagcacagtctgttggagagcct gcaacgcagatgacactgaacacattccatcttgcaggggttgcctccacggtgaccatg ggggttcccaggctcaaagagatttttaatgtaacaaagaacttgaagacgccgtctatg aaaatataccttgatagggagcatggcaagagtatcgaggcagcaaagacaatccagaat gagattgaatgcctcactgtgaaggatctatgccttttttccgagatctactacgaccct gagataacagggactgagatttctgatgacaaggatttcgtggaagcatatttcgagttt ccagatgaggatgttgacttctcgtgtctgtctccatttctaatgaggcttgttgtggat agagctaagcttgttggaaggggaataaatctggagtatgttgcaatgtttatccggaaa gagctaggaggtggtgcacatgttatctgcagtgatgagaatgcagtcaacatggtggta agagttcggacaacaaagtctgaggacgagtccttgaacttctacacgactgcactcaac tcgttgctaaggcttcaacttggaggatacaagaatgttaagaaagtttacataagcgaa gacaaggatagaaaagagtggtatctgcagaccgatgggatctgcctctctcagattcta gggaacccggcagtgaacagcagacttacaatttccaacgacctggttgagattgcggag accttgggaatcgaggctgcgcgagagtctattcttagggagctgacgattgtgatagac ggaaacgggtcgtatgtcaattacaggcacatgagcttgctagccgatgtgatgaccatg agagggtatttgtgcggaataactaggcatggtgttaacaaggttggtgccggagcactg aagagaagctcctttgaggagactgtggagattctcttggatgcagcactggtgtctgaa aagaatatatgcagaggaataacagagaatattatgatgggacagctggcgccgatggga actggaaacattgagattatgctagacatgaagaaattggacaaggccatccctttgtca aatcccgtatttaagccgaatgagcctgctacgccagtgatcagcactccttcatccgat tccttttccatcagcagcgggaactggagtcccacacatcttgaaatggcatattccagg gatctgggcgaaagattgtcacctacaagcccctcctactcaccgacgagtccctcctac tctcctacaagcccttcatactcacctacgagtccctcctactctcctacaagcccttca tactcaccgacgagtccctcctactctcctacaagcccttcatactcaccgacgagtcca tcatactctcctacaagcccttcatactctcctacaagcccttcatactcaccgacgagt ccatcatactctcctacaagcccttcatactcaccgacgagtccctcctactctcctaca agcccttcatactcaccgacgagtccatcatactcagtgtcgatgtctagcttctcaaac aaaaataagagcaagaatcaagatggtgataaaaagaggagaaatgacggttccttctaa

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