Encephalitozoon cuniculi: ECU03_0360
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Entry
ECU03_0360 CDS
T00105
Name
(RefSeq) U6 snRNA associated Sm-like protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ecu
Encephalitozoon cuniculi
Pathway
ecu03018
RNA degradation
ecu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ECU03_0360
09123 Folding, sorting and degradation
03018 RNA degradation
ECU03_0360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecu03019
]
ECU03_0360
03041 Spliceosome [BR:
ecu03041
]
ECU03_0360
Messenger RNA biogenesis [BR:
ecu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ECU03_0360
mRNA degradation factors
5'-3' decay
Lsm complex
ECU03_0360
Spliceosome [BR:
ecu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
ECU03_0360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
858710
NCBI-ProteinID:
NP_597548
UniProt:
Q8SSB9
LinkDB
All DBs
Position
III:44793..45059
Genome browser
AA seq
88 aa
AA seq
DB search
MYPLTLLRISRNRIVELELKNNDQLRGLLHKCDMAMNLHLKSVTIQKEDGSSIFINECYL
KGTSIRLVKLESKILLEQREECVSNNKA
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgtatcccctgactctcctacgaatatcgagaaacaggatagtggagctagaactaaag
aacaacgaccagctaaggggccttcttcacaaatgcgacatggccatgaatcttcacctt
aagagcgtcaccatccagaaagaagacgggagctccatcttcatcaacgaatgctatctg
aaggggacgtcgataaggcttgtgaagctggagtcaaagatccttttggagcagagagaa
gaatgtgtatccaataataaagcatga
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