Encephalitozoon cuniculi: ECU05_1530
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Entry
ECU05_1530 CDS
T00105
Name
(RefSeq) uncharacterized protein
KO
K10754
replication factor C subunit 1
Organism
ecu
Encephalitozoon cuniculi
Pathway
ecu03030
DNA replication
ecu03410
Base excision repair
ecu03420
Nucleotide excision repair
ecu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECU05_1530
03410 Base excision repair
ECU05_1530
03420 Nucleotide excision repair
ECU05_1530
03430 Mismatch repair
ECU05_1530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecu03032
]
ECU05_1530
03400 DNA repair and recombination proteins [BR:
ecu03400
]
ECU05_1530
DNA replication proteins [BR:
ecu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
ECU05_1530
DNA repair and recombination proteins [BR:
ecu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
ECU05_1530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_lid_RFC1
RuvB_N
PTCB-BRCT
nSTAND3
Zeta_toxin
NTPase_1
AAA_16
AAA_5
AAA_14
RNA_helicase
AAA_22
TIP49
AAA_7
AAA_24
AAA_3
AAA_19
OAM_alpha
DUF3811
NB-ARC
TsaE
AAA_17
NPHP3_N
ATPase
DUF815
AAA_33
PPV_E1_C
PBP_dimer
DAPDH_C
AAA_18
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
859163
NCBI-ProteinID:
NP_597496
UniProt:
Q8SRT8
LinkDB
All DBs
Position
V:192996..194702
Genome browser
AA seq
568 aa
AA seq
DB search
MPLEREPLKGKVFVFTGDMKISRDDAKTKVMVLGGRCTAVPSSKTTFLVAGDNPGPSKMQ
KAKELGIKVLDEEEFDSLIKDTSKALDGTAEVEKKTEKAASRDECGSASSGVWSEKYRPS
KRDEIVGNQGIVKQLEDYLQGRTKYKAVLLSGQPGIGKTTTAHVVCKSLGLNVIEFNASD
VRSKLEISNKVKAFVSSQSILRPGSSKSKVLIMDEVDGMSSDRGGIPELISIVKETVVPI
ICICNDRNNPKIRTLSSYCLDLRFRKPDARQILSRVKQILDMEGKKIPDGLLNEIISRGA
GDIRYTISMVQSIALRKALNLKVAENLVRKNVVKNVFDVAGEVFQRRSISEKIDLYFEDY
SLIPLFVSENILKTSFRSARDLSECFDSISLGDVVEKLIRGVSQDWSLAPLHAVYSVVVP
TKGRHLMKKLEFPSWLGQNSKHSKAERILHTVSMHSSCKIRNNPEELRKCSSGLILQKYA
YYLKTHSIDKAISNIVDYDMTKEDIVGLAEIIPGGADLFKGIERKVKLLLDREYKKLKRR
LPYIEAEKIKHDDIEGQSEDDVDLHQED
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcctctggagagagagccattaaagggaaaagtatttgtgtttactggagatatgaaa
atcagcagagatgatgcaaagacgaaggtgatggttcttggggggagatgcacagcggta
ccatcgtcaaaaaccacctttctagttgcaggcgacaacccagggccttcgaagatgcag
aaggcaaaggagctgggaataaaagtactagacgaggaagagtttgatagcctaattaaa
gacacctcaaaggctcttgatggtacggcagaggtagagaagaagacagagaaggcagcc
tctagagacgagtgtggatctgcttcaagcggtgtgtggagcgagaagtacaggcctagt
aagagggacgagatagtggggaatcaagggatcgtaaaacagctcgaggattatctccag
ggtcgcaccaagtacaaggctgttctcctgagtgggcagcctggaattggaaagacaacc
acagcacacgttgtctgcaaatcccttgggcttaacgtaattgaattcaatgccagcgac
gttagaagcaagttggaaataagcaataaggtaaaggcctttgttagcagccagtcaatt
cttcgtccagggtcatccaaaagtaaggttctcataatggacgaagttgatggaatgtcg
agtgataggggaggaatcccggagctcatcagcatagttaaggaaacagtggtgcctatc
atatgcatatgcaacgatcgcaacaacccaaagataaggacactgtcaagttattgcctg
gatctaaggtttagaaaaccggatgctaggcagatactctcaagggtcaagcagatattg
gatatggaaggaaagaaaatcccagatggactgctaaatgaaataatatcaagaggagca
ggagacataagatatactattagcatggtacagagcattgcacttaggaaggcccttaat
ctcaaagtggctgaaaatcttgtcagaaagaatgtggtaaaaaacgtgtttgatgtggcg
ggagaggttttccagagaagatcgatttcagaaaaaatcgatctctacttcgaggattac
tctctaatcccgcttttcgtaagcgaaaacatcctaaaaacctccttcagaagtgcaaga
gatctttcagagtgctttgactcaattagcttaggagatgtcgtggaaaagcttataaga
ggtgtcagccaggactggagtttggcaccactccatgcagtgtacagtgttgtagtccca
accaaagggaggcacctgatgaagaagctagagtttccatcgtggcttggacagaactcc
aaacactcaaaggcagaaaggattctacacaccgtctccatgcattcgtcatgtaaaatc
cgaaacaatccggaggagctgaggaaatgctcttcaggattgatactacagaagtatgca
tactatttgaaaacacactccatcgataaagcaataagcaatatagttgattatgatatg
actaaggaggacatcgttgggctggctgagataataccaggaggagcagatctgttcaag
ggaatagagcgcaaagtaaaacttcttttggatagagagtacaagaaactcaaaagaagg
cttccatatatagaagcagagaaaatcaagcacgacgacatagagggccaaagcgaagac
gatgtagatctccaccaagaagattaa
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integrated database retrieval system
