Encephalitozoon cuniculi: ECU06_0780
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Entry
ECU06_0780 CDS
T00105
Name
(RefSeq) uncharacterized protein
KO
K06100
symplekin
Organism
ecu
Encephalitozoon cuniculi
Pathway
ecu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ECU06_0780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecu03021
]
ECU06_0780
03019 Messenger RNA biogenesis [BR:
ecu03019
]
ECU06_0780
Transcription machinery [BR:
ecu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
ECU06_0780
Messenger RNA biogenesis [BR:
ecu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
ECU06_0780
U7-dependent histone pre-mRNA processing factors
ECU06_0780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
859258
NCBI-ProteinID:
NP_585834
UniProt:
Q8SVB3
LinkDB
All DBs
Position
VI:complement(103905..105680)
Genome browser
AA seq
591 aa
AA seq
DB search
MERIRYHLVERYSEEGLTLLIFYLRNMSPMEMVYFFCTASKILDRSSSVILLAYLRHAQT
KGMECPRYAQRSLNYHVHVLNKRISKMVPNAFRQFVSEMKLLDFTEVRGRKVEEAKKEFD
PLRFLIDTVFETLVKSSNAEIENTVQTYFHEKKERMLPSPVSESFSLLGKIKEEDAIDAS
ISRIVRMLDVEDSPEVLAFVSKNEKYAHSFFFYAYLLNRDVYESMVGLVLESKQYFRVDI
IKCLVALDVKKTVERITDESVEVLNYLIRERRIHVKEIVEMISEQRVDVGRESILGVFRE
NYETLKDYASCFRLSGQELIEVSRSNDQALPLALDAVDSQEAMDSFVDLLKEKEDTVVVD
LVRSISDEQKKERLIQTVLKRRAVRGQLRVYLLDNYMEDSRFIYGLLPYLEKSDVYKYIP
DYVVDNESLNVFLKVVECSELLIFAHRISDVPKAIRILNLCFKSPKFSESDFLFTLTTLE
KELPLLIVRTLIQTLVKFPNLKNFVVSFLSRLVRRNIWKQEEMVEGVAKCFEMIGPPAVD
IILYLDPDAMSRILGKSRGLRRLCREHLKREVSDKHHDAVLKSVMGRFGNK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggataagataccacctggtggagaggtattccgaagagggcctgacacttctt
atcttctatctcaggaacatgagcccgatggagatggtatacttcttctgcacagcttca
aagattctggacagaagcagctcagtgatcctgcttgcatatcttcggcacgcgcagacc
aaggggatggagtgcccgaggtatgcacagaggtcgctgaactaccacgtgcatgtgctg
aacaagaggatatccaaaatggttccaaatgcctttaggcagtttgtctctgagatgaag
ctgcttgacttcacggaggtgcgtggacgaaaggtggaggaggcgaagaaggagtttgac
cctctcagatttcttattgacactgttttcgagactcttgtgaagagcagcaacgccgag
attgagaatacggtccagacgtacttccacgagaagaaggaaaggatgctccccagtcct
gtcagcgagtctttcagtcttctcggcaaaatcaaggaagaagatgcaatagatgcaagc
atttcaaggattgtgaggatgctggatgttgaggactctccggaggtcctggcgtttgtt
agtaagaatgagaagtatgcccactccttttttttctatgcatatctcctgaaccgcgat
gtctatgagtcgatggtcggcctggttctcgaaagcaagcagtacttccgggtggacatc
atcaaatgccttgttgcacttgatgtgaagaagactgtggagagaataaccgacgagtcg
gtcgaggtgctgaactatctgatcagagagaggagaatccatgtcaaggaaattgtggag
atgatttccgagcagagagtagatgttgggagagaaagcattctcggggttttccgggag
aactatgagactctcaaggactatgcctcctgctttaggctgagtgggcaggagttgatt
gaggtttccaggtcgaatgaccaggctttgcctcttgccctggacgcagttgactctcag
gaagccatggacagctttgtcgacttgctgaaggagaaggaggacactgttgtggttgac
cttgtcaggtctatcagcgatgagcagaagaaggagaggctcatacagactgttctcaaa
agaagggcggtccggggccagctccgggtctatctgctggacaactatatggaggacagc
cgttttatatatggcctgcttccgtatctggaaaagtctgacgtgtacaagtacattccc
gattacgttgtcgacaacgagtctctgaatgttttcctgaaggttgtggagtgttctgag
cttctgatctttgcccacagaatctcggatgtcccaaaggccattcggattctcaacctc
tgcttcaagtctccgaagtttagcgagagcgactttctgtttaccctaacaactctggag
aaggagctgcccctcctgattgtgaggacactgatccagactctggtgaagttcccgaac
ctgaagaactttgtcgtttcatttctgtccagattggtcaggagaaacatatggaagcaa
gaggagatggtggagggtgtggcaaaatgctttgagatgattggtcctcctgcagtcgac
ataatcctgtacctggatccggatgcaatgtccaggatactggggaagagcagggggctc
aggagactctgccgcgagcacctgaagcgggaggtttctgacaagcaccacgatgcagtg
ctaaagtctgtgatgggccggtttggtaataaatag
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