KEGG   Encephalitozoon cuniculi: ECU07_0840
Entry
ECU07_0840        CDS       T00105                                 
Name
(RefSeq) DNA-directed RNA polymerase subunit RPB8
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
ecu  Encephalitozoon cuniculi
Pathway
ecu03020  RNA polymerase
ecu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ecu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ECU07_0840
  09124 Replication and repair
   03420 Nucleotide excision repair
    ECU07_0840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecu03021]
    ECU07_0840
   03400 DNA repair and recombination proteins [BR:ecu03400]
    ECU07_0840
Transcription machinery [BR:ecu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     ECU07_0840
  RNA polymerase III system
   RNA polymerase III
     ECU07_0840
  RNA polymerase I system
   RNA polymerase I
     ECU07_0840
DNA repair and recombination proteins [BR:ecu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      ECU07_0840
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 859441
NCBI-ProteinID: NP_586012
UniProt: Q8SRJ5
LinkDB
Position
VII:complement(108178..108540)
AA seq 120 aa
MQILADNFKVSDIDREGKLYANVSRAYMKSPTVDIALDYNTVLCRLQTGHALEVRIFRGI
SEDIECHYLVCGRVYSVEYKGGRALVKASFGGLLLSMDAPEEGVRDIGDKDEISLALTFI
NT seq 363 nt   +upstreamnt  +downstreamnt
atgcagatcttggcagacaacttcaaggtctccgacatcgacagagaaggcaagttgtac
gcaaacgtctcgagggcatacatgaagtcccctaccgtcgacattgcccttgactacaac
accgttctctgcaggctccagacaggccacgctcttgaagtacgtatcttccgaggaatc
agtgaggacattgaatgccactatctagtctgtggaagggtctattccgtggagtacaag
ggaggtcgagcccttgtaaaagcttcgttcgggggccttctgctcagcatggatgctccc
gaggagggggtcagagacatcggagacaaggacgagatatccctggcgcttaccttcata
tag

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