Encephalitozoon cuniculi: ECU09_0760
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Entry
ECU09_0760 CDS
T00105
Name
(RefSeq) uncharacterized protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
ecu
Encephalitozoon cuniculi
Pathway
ecu03008
Ribosome biogenesis in eukaryotes
ecu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ECU09_0760
09123 Folding, sorting and degradation
03018 RNA degradation
ECU09_0760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecu03021
]
ECU09_0760
03019 Messenger RNA biogenesis [BR:
ecu03019
]
ECU09_0760
03009 Ribosome biogenesis [BR:
ecu03009
]
ECU09_0760
03016 Transfer RNA biogenesis [BR:
ecu03016
]
ECU09_0760
Transcription machinery [BR:
ecu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
ECU09_0760
Messenger RNA biogenesis [BR:
ecu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
ECU09_0760
Ribosome biogenesis [BR:
ecu03009
]
Eukaryotic type
Pre-60S particles
RNases
ECU09_0760
Transfer RNA biogenesis [BR:
ecu03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
ECU09_0760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_N
XRN_M
zf-CCHC_4
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
860415
NCBI-ProteinID:
NP_001402330
UniProt:
Q8SQN6
LinkDB
All DBs
Position
IX:95280..97247
Genome browser
AA seq
655 aa
AA seq
DB search
MGVPSLFRWLQLSHKETIHSIMEKPSVDALYLDFNAIIHTCIKPGLGSEEEIERDLYKTV
GDFIDHILLKTRPRKLLYIAVDGVAPRAKLSHQRARRYKSALGKKEGSAVIAAAKADPTM
SSPSEKKDEIPNEEFTGESSLYDKFIAEDPSESSSLAIDVETEKFDLNCITPGTPFMERL
HKVLISYIQCKLSSDPEVSNLRIIYSSYLVPGEGEQKIMSFIRSQGSIARNDVHMIYSPD
GDLIFLGLSLQRNRVLIMRDYFSPSKERRKRTCTKCGRTGHSDEECGVFTNYHFVYVNIS
ELRTRLIREFRRHTAQRFSEERILDDWIFLCFLLGNDFVPPIPCLDIRFHSIETITEIMM
KSFSEMKSYITCNKMINYQALRNFYAILASKEDGLYHRKSQSLDKFREGLKGMPRIVYEK
IPIHTKTGKVQYYTSKLNATTESDIKNICYEYVKGLYWVYSYYVLGWTGWDWYYPYHFAP
LAADLSKLSINDIQISPGHPLRPLEQLLVVLPPMSRGMVPEGLQPIFDDYKDYYPEDVKT
DMFDKVYLWQEIVLLPFMDFRPILSENAVKFNTLGYEDLSRNLRSLDLLFTTDKKSSEVI
LGMYSKLKPMCSIRSPGYFGTICPYSFASFPGDVLEYNGARFVNKTVVAFIEPRN
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaccctcactgttcagatggctacaactctcccacaaggaaacaatacacagt
atcatggaaaagccttcagtagacgccctgtacttagacttcaatgcaataatccacacc
tgcatcaagcctgggctaggatctgaggaggagatcgaaagggacctctacaagactgta
ggggacttcattgaccacattctccttaagacacgccccagaaagctgttatacatagca
gttgatggggttgcaccacgtgcgaagctaagccaccagcgggcgcgtagatacaagtct
gcccttgggaagaaggaggggagtgctgtcatagctgctgccaaagcggatcccactatg
tcatcgccaagcgagaagaaggatgagattcccaacgaggagttcacgggagagagctct
ctatatgacaagttcattgcagaggacccttctgagtcgtcctcccttgccatagatgtg
gagacagagaagttcgatttgaactgcatcactcccgggactccctttatggagagactc
cacaaggttttaatttcctacattcaatgcaagctcagcagtgatcctgaggtttccaat
ctaaggataatctactccagctatctagttcctggggagggagagcagaagatcatgagc
tttatacggagccaggggtcgattgcaaggaatgacgtccatatgatctattcgccggac
ggagacctgatatttcttgggctttccttgcaaaggaacagggtcttgataatgagagat
tatttcagcccaagcaaggagcgcaggaagagaacttgcacgaagtgtggacggaccggc
cactccgacgaagaatgcggggtgttcaccaactaccactttgtgtatgtcaacatctcg
gagcttaggacacggcttatcagagagttcaggaggcacacagcacagagatttagcgaa
gagaggattctagacgactggatattcctctgcttcctccttggaaacgactttgttcct
ccaatcccatgcctggacataagattccactccattgagactattactgaaatcatgatg
aagagcttttccgagatgaagtcgtacattacgtgtaataagatgataaactaccaggcg
ctgagaaacttctatgcaattcttgcaagtaaggaggacggtctgtaccaccggaagtcg
cagtccctggacaagttccgggaggggctgaagggcatgccaaggattgtttatgaaaag
attccaatccacacgaagacagggaaagtccagtactacacttcgaagctgaatgcaacc
acagagtctgatatcaagaacatatgctacgagtatgtgaagggcctctattgggtgtac
tcgtattatgttctcgggtggaccggatgggactggtattatccatatcactttgcacct
cttgcagcagatctatccaagctctccatcaacgatatccagatcagccccggacatcct
ctgaggcctcttgagcagcttcttgttgttctgcctccaatgagccgcgggatggttcct
gaggggctccagcctatatttgacgactacaaggattactacccagaagatgtgaagacc
gacatgtttgacaaggtttatctgtggcaggaaattgtccttcttccgtttatggacttc
cggcctatcctatctgaaaatgccgtgaagttcaacactctgggatacgaggatctgagc
agaaacctaaggagtctagacctgcttttcacaaccgacaagaagtcctctgaggttatt
ctgggcatgtactctaaactgaagccaatgtgctcaatcagaagccctggatattttggg
accatctgcccctattcgtttgccagctttcctggagatgtgcttgagtataatggcgca
agatttgttaacaagactgtcgttgccttcatagagcccaggaattaa
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