Encephalitozoon cuniculi: ECU11_0220
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Entry
ECU11_0220 CDS
T00105
Name
(RefSeq) uncharacterized protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ecu
Encephalitozoon cuniculi
Pathway
ecu03022
Basal transcription factors
ecu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ECU11_0220
09124 Replication and repair
03420 Nucleotide excision repair
ECU11_0220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecu03021
]
ECU11_0220
03400 DNA repair and recombination proteins [BR:
ecu03400
]
ECU11_0220
Transcription machinery [BR:
ecu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ECU11_0220
DNA repair and recombination proteins [BR:
ecu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ECU11_0220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
ZNF512_C2HC
TRAF3_RING
Zn_ribbon_6
DUF7129
zf-UDP
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
859979
NCBI-ProteinID:
NP_586328
UniProt:
Q8SQZ2
LinkDB
All DBs
Position
XI:complement(27993..28676)
Genome browser
AA seq
227 aa
AA seq
DB search
MEERRCPVCKSDIYLNPDIVIYISPCFHRMCESCMFRIFSRGQAPCPECGTILRKINYIK
PTFEDITVEKECKVRRILLRAFGREEEEFGGDSAKYNDYLEKFEELVFEVLELKNESLVK
EKVKKIQEMGQDSILNPTPKVMPGKTKNVLQGRKRQGYGLASEDGNKTQKIGIISDYFDP
EELPRIVVEPTKKIYLPKGFLQPNAPGGLSYNTIVSLAISSIGNPNI
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagacggtgtccggtatgcaaaagcgacatctacttgaatccagacatagta
atatacataagcccctgcttccacaggatgtgcgagtcgtgtatgtttaggatatttagt
aggggtcaggcaccatgcccggaatgtggaacgatactaaggaagataaactacattaag
ccaacctttgaagatataacagtcgagaaggaatgcaaggttcggaggattctcctaagg
gcctttgggagggaggaggaggagtttggcggagactctgcaaagtataacgactatctc
gagaagtttgaagagcttgtttttgaggttttagagctgaagaatgagtctcttgtgaag
gaaaaagtaaagaagatacaagagatggggcaggattctattcttaatcccactccaaag
gtcatgccgggcaagaccaagaatgttctccaaggcagaaaaagacagggatatggactg
gcctcggaagacggcaacaaaacgcagaaaatcggcattattagtgattactttgaccca
gaagagcttccaagaatagttgtggagcctaccaaaaaaatttacttaccaaaaggattt
ctccagcccaacgcccctggcggattgtcatacaacaccattgtatctcttgctatctca
tcgataggtaaccctaatatttag
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