Encephalitozoon cuniculi: ECU11_0635
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Entry
ECU11_0635 CDS
T00105
Name
(RefSeq) uncharacterized protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ecu
Encephalitozoon cuniculi
Pathway
ecu03018
RNA degradation
ecu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ECU11_0635
09123 Folding, sorting and degradation
03018 RNA degradation
ECU11_0635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecu03019
]
ECU11_0635
03041 Spliceosome [BR:
ecu03041
]
ECU11_0635
Messenger RNA biogenesis [BR:
ecu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ECU11_0635
mRNA degradation factors
5'-3' decay
Lsm complex
ECU11_0635
Spliceosome [BR:
ecu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
ECU11_0635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
77136436
NCBI-ProteinID:
NP_001402552
UniProt:
I7IV51
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All DBs
Position
XI:88890..89123
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AA seq
77 aa
AA seq
DB search
MNKDKKKTQLLSDLGRFKGKKITVTFIDGKSVTGKLASFDDVGNCVLKKCGEWSYGNTVV
CLGRSIVLICLNTPYVL
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagacaaaaagaagacccagctgctcagcgacttgggcagattcaaggggaaa
aagataacagtaaccttcattgacggaaagtctgtaactgggaagcttgcgtcgtttgac
gatgttggtaactgcgtgctaaagaaatgcggagagtggagctatgggaatactgtagtg
tgtctaggaagaagcatagttcttatttgtttgaatactccatacgtcttgtga
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