Encephalitozoon cuniculi: ECU11_1140
Help
Entry
ECU11_1140 CDS
T00105
Name
(RefSeq) uncharacterized protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ecu
Encephalitozoon cuniculi
Pathway
ecu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECU11_1140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecu03019
]
ECU11_1140
Messenger RNA biogenesis [BR:
ecu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
ECU11_1140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
Motif
Other DBs
NCBI-GeneID:
860073
NCBI-ProteinID:
NP_586420
UniProt:
Q8SU35
LinkDB
All DBs
Position
XI:144131..145210
Genome browser
AA seq
359 aa
AA seq
DB search
MNLLDMSVRFVEGINLLLHHGRCSMDASEVERLMQRINEVQLLVRDSERNFRQILKSTEE
GNVRRSSVVIITRDKVPICILGEEIAKPSIEDIDIESVECSHTPSFHEFMPFSNTVFVNT
KAQLLAIDRTITQAAIEVFDHTYRSYEGFVCFISAGDTRGNVYVIDAIKLRTVIPRLRLL
GCNVPKIVHCGNCVQRLLKDFKHLGCYRSYEIPSDMVFIDWRIRPVPEFLLEVLCKGVCR
IGEMLTNGVKMKTSCTKEVDEVEDIASRYSISSNRDVLRALLRLRRFLAKSNDESVHYVM
TDDQVVKLLEIRPDTRDKLLGGLRRLSPLAKQHVMDFLYIFSSGGRGFLLQNLTISGRE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactcgacatgagcgtcaggtttgtggaggggatcaatttactcttgcaccac
gggaggtgcagcatggatgcctcagaggtggagaggctgatgcaaagaatcaacgaggtg
cagctgcttgtgagagactcggaaaggaactttcggcagattctcaagagtactgaggag
ggcaatgttaggcgcagtagtgttgtgatcataacaagagataaggtgccaatatgcatc
cttggagaagagatagctaagccaagcatagaggacatcgacatagagagcgttgagtgc
agccacacaccatcattccatgagttcatgccgttttcaaataccgtgtttgtgaacacc
aaggcccagttgctagcaattgataggacgattacacaagctgcaatagaggtgtttgac
cacacgtacagatcatacgagggatttgtgtgctttatctcagcaggggacacaaggggc
aatgtctacgtaatagatgcaatcaagcttagaacagtcattccaaggctgcggctactt
ggatgcaatgtcccgaagatagttcactgtggaaactgtgtccagaggcttctcaaggac
tttaagcatcttggatgctacagaagctacgagatcccttcagacatggtttttattgat
tggagaatacgtcctgttccggagtttctcctcgaggtcctatgtaaaggagtctgcaga
ataggagagatgctcaccaacggagtcaaaatgaagaccagctgcaccaaggaagtcgat
gaggtcgaggacatcgcctcaagatacagcatctcgagcaatagggatgtcctcagagcc
ctcctgaggctgagaaggtttcttgcaaaaagcaacgacgagtctgtgcactatgtcatg
acagacgaccaggtagtcaagctattggagatcaggccagacacacgggataagctgctt
ggagggcttaggaggctctcgccgctggcaaaacagcatgtgatggactttctgtatata
ttcagcagcggaggcagaggatttctgttacagaatctcacgatttcaggcagggaatga
DBGET
integrated database retrieval system
