Entry |
|
Symbol |
polA
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Name |
(GenBank) DNA polymerase I
|
KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:ecul00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVA46_03105 (polA)
03410 Base excision repair
PVA46_03105 (polA)
03420 Nucleotide excision repair
PVA46_03105 (polA)
03440 Homologous recombination
PVA46_03105 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:ecul03032]
PVA46_03105 (polA)
03400 DNA repair and recombination proteins [BR:ecul03400]
PVA46_03105 (polA)
Enzymes [BR:ecul01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVA46_03105 (polA)
DNA replication proteins [BR:ecul03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PVA46_03105 (polA)
DNA repair and recombination proteins [BR:ecul03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PVA46_03105 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PVA46_03105 (polA)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
complement(657255..659984)
|
AA seq |
909 aa
MSKPLYILDGYALIYKSYYSMGKQAPLRNSKEENITAIVVFFRSLFSLIKNFDIEHFVVA
LDPIEPTFRRKRYPEYKAHRPAPPDELRSQSDHIERILTECGFITLRIGDNEADDIIASL
AWQRHQTGLATVIISGDKDLMQLLNEEITMLRFTTKREFKAGVEPMSASDVLPKMGVPPH
QIHDYLAILGDASDNIPGVAGIGEKGAIKLLEKHHSLKRIYDEINHVTPAGTRDKLIRAK
EMAFLSWELVDLKRDIDLPSINIEAFHLASVHFSRLHQALEALGIKQILSDIPPIASRFQ
HQLELNSQPDSQPQKLPLTYALITTIPELINLFKEIEQAGIVAYDSETTGLNPRQDQIVG
MSFSLDGKHGYYIPFSAPKGEATLAFDEALPHLKKLFASGVKFIGQNLKFDMQFLFPLDI
ILTPYFDTMIAAWLIDSQSPVNLDTLAKRYLNHQTIHYSDIVAKNQRFDEVSLTLSTEYA
CEDASLAFALYQLFRPQMESLQLDRLFFDLEMPLVSILARMEWRGIELDAQALRDYGQQL
ERQSKELEAQIIDLVGHSFNVQSPKQLAQVLFEELGFTDLKKGSTDVHILRELQRLHPED
LLIPAVLEYRKVAKLKSTYVEGLLKEITPENAIHTSFLQSGTASGRLSSINPNLQNIPIK
NEEGRKIRQAFQSREGYQLISADYSQIELVVLAHLAQDPIMLETFANGRDLHRETASFLF
QLPQEQVSSEQRRIGKTINFGVIYGMSAFRLSNELKIPRALATKFIDSYFARYAKVREFV
QKSVAYANEHGEVRTVLQRRRLIHQINSKNHNERLASERIALNTVIQGSAADIVKLAMLR
VNTLLQEYQLNAHLLLQVHDELILEVHHDHLDIAKTLLTQAMQEAGKSLPAPIPLTINLE
SGKKWGEFH |
NT seq |
2730 nt +upstreamnt +downstreamnt
atgtctaaaccgctctacattctcgacggctacgcgctcatctataaatcctactacagc
atgggtaagcaagccccattgcgcaatagtaaagaggaaaatatcaccgcaatagtggtc
ttttttcgctcactcttttctctcataaaaaattttgatatcgaacactttgtcgtggcg
ctagatcctatcgaaccgaccttccgacgcaagcgctatcccgaatataaagcccatcgc
cccgcccccccagacgaactacgtagccaaagcgatcacattgaacgcatcttaaccgag
tgtggttttatcaccttacgcattggggataacgaggccgatgacatcatcgcctcgctg
gcttggcaacgccatcaaaccggattagctaccgtaattatctctggggataaggattta
atgcagttgctcaatgaggaaatcacaatgctacgtttcacgaccaagcgtgaatttaaa
gcaggggtcgaacccatgagcgcatccgacgttctgcccaaaatgggcgtaccgcctcac
caaatccacgactatctcgcgattctgggagacgccagcgacaatatcccaggggtcgcc
ggtatcggggagaaaggtgctatcaagctcttagagaagcaccactcgcttaagcgtatc
tatgacgaaatcaaccacgtaacccccgccggcacgcgcgataagctgatccgtgccaaa
gagatggccttcttgagttgggagcttgtcgacctcaaacgcgacatcgacctacccagc
atcaacatagaagcgttccacctcgcctcagttcactttagtaggctccatcaagcgtta
gaggcgctgggcatcaaacaaattttatccgatatcccacccattgcctcgcgttttcag
caccaacttgagctaaactcccagcccgacagccaaccgcaaaagctcccgctcacctac
gccctcatcaccaccattcccgaacttatcaacctctttaaggagatcgaacaagcaggt
attgttgcctacgacagcgagacaactggcctcaacccgcgccaagatcagatcgtgggg
atgagctttagcctcgacggcaagcacggttattatatccccttctctgcaccaaaagga
gaagcaaccctcgcctttgacgaagcgctaccccacctcaaaaagctctttgctagcggg
gtcaagttcatcgggcaaaacctcaaattcgatatgcagtttctttttccactagacata
atactcaccccatacttcgacaccatgatcgcggcatggctcatcgacagccaatcaccg
gtcaacctcgataccctcgccaagcgctatctcaaccaccaaaccatccattacagcgat
attgtcgccaaaaaccaacgcttcgatgaggtctccctcacgctaagcaccgagtacgcc
tgcgaagatgccagcctcgccttcgctctctaccaactctttcgcccacaaatggaaagc
ctgcagttagatcgactctttttcgatctcgagatgccccttgtctcgattcttgcgagg
atggagtggcggggaatcgagctggatgcccaggccttacgcgactatggtcagcaactt
gaacgtcaaagcaaggagctagaggcgcaaatcatcgatctcgtggggcattcttttaat
gtccaatcaccaaaacagctcgctcaagtgctcttcgaggagttaggctttaccgacctc
aaaaaaggctccaccgatgtccacattttgcgcgaactgcaacgcctccacccagaagat
ctcctcattccagcggttttagagtaccgcaaagtcgcaaaactcaaatccacctacgtc
gaaggactactcaaagagatcacgcccgaaaacgccatccacaccagctttttacagagt
ggaaccgccagcggtcgcttgagtagcattaatcctaatctccaaaacatccccatcaaa
aatgaagaagggcgcaaaatccgccaagcgtttcaatcgcgcgagggctaccaactgatc
agtgctgactatagtcaaatcgaactggtcgtgcttgctcaccttgcccaagatcccatc
atgctcgagacctttgccaatgggcgcgatctccatcgagagacagcaagcttcctcttt
caactcccacaagagcaggtctccagcgaacagcgacgcattggcaagactatcaacttt
ggggtgatctacgggatgtcggcttttcgccttagcaacgagcttaaaattccccgcgct
ttagccactaaatttatcgactcctactttgctcgctatgcaaaagtccgagagttcgta
caaaagagtgtcgcctacgccaacgagcatggcgaggtgcgtaccgtcctccagcgccgt
cgcctcatccaccaaatcaacagtaaaaatcacaacgaacgccttgccagcgaacgcatc
gcccttaataccgtcatccaaggtagtgctgccgatatcgtcaagctggccatgttgcgt
gtcaataccctcctccaagagtaccaactcaatgcacacctcttgctccaagtccacgac
gaactcatcctcgaagtccatcacgatcatctcgatatcgccaagactctcctcacccaa
gccatgcaagaggccggaaagagtctgcctgcgccaattcctcttaccatcaacctcgaa
agcggaaaaaagtggggagaattccattaa |