Entomospira culicis: PVA46_07100
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Entry
PVA46_07100 CDS
T08829
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ecul
Entomospira culicis
Pathway
ecul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVA46_07100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecul03019
]
PVA46_07100
Enzymes [BR:
ecul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVA46_07100
Messenger RNA biogenesis [BR:
ecul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PVA46_07100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
AFOR_N
HTH_OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
WDI37079
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All DBs
Position
1499244..1500977
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AA seq
577 aa
AA seq
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MQFSQFPLDPRLLKGLQAINYETCTPVQEATLKAVLEAKKDVYAQSQTGTGKTASFLIAT
FWHLLKPENQDKFALILVPTRELVVQIEKEAKAIGQFLSFNMATIYGGTAYDKQLHSLRR
NPRIVVATPGRLLDFADKQAINLQNAGVLVIDEADRLFDMGFHKDLLKIIKMLPAPQDRL
NLLFSATLNNKVGQLAWEHMNNPESIVIKAQSPTVEGIEQRLFHVSRSEKMILLLALLKK
ENPESVIIFSNTKAGAGQIAKRLKAAGYNCALIEGSIQQKKRLQIINNMKNGNIKILAAT
DIASRGLHIPDLSLVINFDLPDDAENYIHRIGRTARGSQTTGLAISFACERFVYNLASIE
KLIKKKIPMSIIDNELQQLVDLTIKEEASRPKPVGQESTSHYEHRRKDHPRREPSSSPRS
SRNYGEKSPKSNHKPTNTRPKTTKDHAPERDHEVHPPREATRKPRPDRPARSQHDRNDRP
QTERPTRSSHPRNDRPDRPQRSAPSDRTPRNGQHESRAKHSRSHTTASQQNRPQSPHQAK
PKGASHPNPPKPKGQKPHEDKSKGIFNFFNKIFSKED
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttcacaatttcccctagatcctcggctactcaaagggcttcaggctatcaac
tacgaaacctgtacacccgttcaagaggccacgctcaaagccgtactagaggccaagaaa
gatgtctacgcccagagccaaaccggtaccggcaagacggcatccttccttatcgccacc
ttttggcatctcctcaaaccagaaaaccaagataaattcgccctcattcttgtacccacc
cgcgagcttgtcgttcagattgagaaagaggctaaagccatcggacaatttctctccttt
aacatggccaccatctacggtggaaccgcctatgacaaacagctccacagccttagacgc
aatccacgaatcgtcgtcgccaccccaggccgcctcctagactttgccgacaagcaagcc
atcaaccttcaaaacgccggcgttctggtcatcgacgaagccgatcgtctcttcgatatg
ggctttcataaagatcttctaaaaatcatcaagatgctccccgccccacaagatcgcctc
aacctcctctttagcgccaccctcaacaacaaggtcgggcaactcgcttgggagcacatg
aataaccctgagagcatcgtgattaaagcccaatcccccaccgtcgagggaatcgaacag
cgcctcttccacgtcagccgtagcgaaaagatgatcctcctcttggctctcctcaaaaaa
gagaaccccgaaagtgtcatcatctttagtaacaccaaggcgggggcgggacaaattgcc
aagcgcctcaaagctgccggctataattgtgcgctcatcgaaggcagtattcagcagaaa
aagcgtctacaaatcatcaataacatgaaaaatggcaacatcaaaatcctcgctgccacc
gatatcgcctcccgtggactacacatcccagacctctcgctcgtcatcaacttcgacctc
cccgacgatgccgaaaattacatccaccgcatcggacgcaccgcccgtggctcacaaacc
accggtcttgccatcagcttcgcctgtgagcgctttgtctacaacctcgcctccatcgag
aagctcatcaaaaagaagatccccatgtccatcatcgacaacgagcttcaacaattggtc
gatctcaccatcaaagaggaagcatcgcgccccaaacctgtcgggcaagagtcaacctcg
cattacgaacatcgtagaaaagatcatcccagacgcgaaccttcttcctctcctcgctcc
agtcgcaattacggcgaaaaatcccccaaaagcaaccacaaacccaccaatacccgcccc
aaaaccaccaaagatcacgcgccagaacgcgaccacgaagtacacccaccacgagaagca
acgcgtaaacctcgccccgatcgcccagcccgatcccagcacgatcgtaacgatcgccca
caaaccgaacgccccacacgctcgtcccacccacgcaatgatcgccccgatcgtccccaa
cgctctgcccctagcgaccgtaccccccgcaatggtcaacacgaatcgcgtgcgaaacat
tcccgatctcatacaacagcctctcaacagaatcgcccacaaagcccccatcaggctaaa
ccaaaaggcgcatcccaccccaatccacccaaaccaaagggacagaagcctcacgaagat
aagtctaaaggcatcttcaattttttcaacaaaattttctccaaagaggattaa
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