Escherichia coli APEC O1 (APEC): APECO1_1218
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Entry
APECO1_1218 CDS
T00425
Symbol
ybjD
Name
(GenBank) conserved hypothetical protein
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
ecv
Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
APECO1_1218 (ybjD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2813
OLD-like_TOPRIM
AAA_15
AAA_21
AAA_29
AAA_23
ABC_tran
SMC_N
Amidohydro_3
Motif
Other DBs
NCBI-ProteinID:
ABJ00254
UniProt:
A0A0H2YXD5
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Position
878859..880517
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AA seq
552 aa
AA seq
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MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF
WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLVACWTPCTDGYHRIFYRLEGESAE
DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE
VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE
QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH
PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED
SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK
PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ
GFSDVFHRVAQIPENIPMNLRKVISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF
SRVLWLARGRAD
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgattcttgagcgcgttgaaattgtgggttttcgcggtatcaaccgtttgtcgttgatg
ctggaacaaaacaacgtcctgattggggagaacgcgtggggtaaatccagcttgctggac
gccttaaccctgctgctatcgccagaatcagatctctaccattttgagcgcgatgatttc
tggttcccgccgggagatatcaacgggcgagaacatcatctgcatattattttgaccttc
cgcgaatcgctgccaggccgacatcgggttcgccgctatcggccgctggtagcgtgctgg
acgccatgcaccgatggttatcaccgtattttttatcgtctggaaggggagagtgcggaa
gacggcagcgtgatgacactgcgcagttttctcgataaagacggacatccgattgatgtt
gaggatattaacgatcaggctcgtcatctggtgcgtttaatgccggtgctgcgcttgcgt
gatgcccgttttatgcgccgtattcgtaacggcacggtgccaaatgtccccaatgtggaa
gtcaccgcgcgccagctcgatttcctcgcccgtgaattatcctcacatccgcaaaatctc
tctgatgggcagattcgtcagggactttccgcaatggtgcaacttcttgagcattatttt
tctgagcagggagctggacaggcgcgatatcgtttaatgcggcggcgagccagcaatgag
caacgaagctggcgctatctggatatcatcaaccggatgattgaccgacctggagggcgc
tcgtatcgggttattttgctcggcctgtttgctactttattgcaggcaaaaggcacattg
cgactggataaagacgcccgtccattgttgctgatcgaagatccagaaacccgtttacac
cccattatgctttcagttgcctggcatctgttgaatcttctgccattgcagcgcattgcc
accaccaactctggcgagctgctttcgttaacgccggtagagcatgtttgccgactggta
cgtgagtcctcgcgcgttgccgcctggcgtctgggaccgagtggcttgagtaccgaagat
agccgacgcatctcctttcacattcgttttaaccgtccgtcatcgctgtttgcccgctgt
tggctgctggtggaaggggaaacggaaacctgggttatcaatgaactggcgcgtcagtgc
ggacatcattttgatgccgaagggatcaaggtcattgagtttgcccagtccggactaaag
ccactggttaaatttgcccggcgaatggggattgaatggcatgtactggtcgatggcgat
gaagcagggaagaaatatgccgctacggtacgcagcctgttgaataacgatcgggaagcc
gaacgagaacatttaacggcgttaccggcgctggatatggaacattttatgtatcgccag
ggattttccgatgtgttccaccgcgtggcgcaaatcccggaaaatataccgatgaatctg
cgcaaagttatctcgaaagcgatccatcgctcttccaaacccgatcttgccattgaagtg
gcaatggaggccggacgtcgtggtgtggactccgtaccgacgctgctgaaaaaaatgttc
tcacgcgtgctgtggctggcgcgcggtcgggccgactaa
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