Escherichia coli APEC O1 (APEC): APECO1_1612
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Entry
APECO1_1612 CDS
T00425
Symbol
sbcD
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ecv
Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecv03400
]
APECO1_1612 (sbcD)
DNA repair and recombination proteins [BR:
ecv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APECO1_1612 (sbcD)
Archaeal homologous recombinant proteins
APECO1_1612 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
MIP-T3_C
Motif
Other DBs
NCBI-ProteinID:
ABI99857
UniProt:
A0A0H2YWD0
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Position
complement(431597..432823)
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AA seq
408 aa
AA seq
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MLFRQGTVMRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQAHQVDAIIVAGDVFDT
GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP
QILPRRDGTPGAVLCPIPFLRPRDIITSQAELNGIEKQQHLLAAITDYYQQHYADACKLR
GAQPLPIITTGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM
EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ
LEQWRDISQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ
QRETLSELSVEEVFNRRLALEELDESQQQRLQHLFATTLHSLAGEHEA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcgccagggaaccgttatgcgcatccttcacacctcagactggcatctcggc
cagaacttctacagtaaaagccgcgaagccgaacatcaggcttttcttgactggctgctg
gagacagcacaagcccatcaggtggatgcgattattgttgccggtgatgttttcgatacc
ggctcgccgcccagttacgcccgcacgttatacaaccgttttgttgtcaatttacagcaa
actggctgtcatctggtggtactggcaggaaaccatgactcggtcgccacgctgaatgaa
tcgcgcgatatcatggcgttcctcaatactaccgtggtcgccagcgccggacatgcgccg
caaatattgccccgtcgcgacgggacgccaggcgcggtgctgtgtcccatacctttttta
cgcccgcgtgacattattaccagccaggcggagcttaacggtattgaaaaacagcagcat
ttgctggcggctattactgattattatcaacaacattatgccgatgcctgcaaactgcgc
ggcgctcagcctctgcccatcatcaccactggacatttaacgaccgtgggtgccagtaaa
agtgacgccgtgcgtgacatttatattggcacgctggacgcgtttccggcacaaaacttt
ccaccagccgactacatcgcgctcgggcatattcaccgcgcgcagattattggcggcatg
gaacatgttcgctattgcggttcccccataccactgagttttgatgaatgcggtaagagt
aaatatgtccatctggtgacattttcaaacggcaaattagagagcgtggaaaacctgaac
gtaccggtaacgcaacccatggcggtgctgaaaggcgatctggcgtcgattaccgcacag
ctggaacagtggcgcgatatatcacaggagccgcctgtctggctggatatcgaaatcact
actgatgagtatctgcatgatattcagcgcaaaatccaggcattaaccgaatcattgcct
gtcgaagtattgctggtacgccggagtcgtgaacagcgcgagcgtgtgttagccagccaa
cagcgtgaaaccctcagcgaactcagcgtcgaagaggtgttcaatcgccgtctggcactg
gaagaactggatgaatcacagcagcaacgtctgcagcatcttttcgccacgacgttgcat
agcctcgccggagaacacgaagcatga
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