KEGG   Escherichia coli APEC O1 (APEC): APECO1_2078
Entry
APECO1_2078       CDS       T00425                                 
Symbol
hsdS
Name
(GenBank) HsdS, type I site-specific deoxyribonuclease
  KO
K01154  type I restriction enzyme, S subunit [EC:3.1.21.3]
Organism
ecv  Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:ecv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecv02048]
    APECO1_2078 (hsdS)
Enzymes [BR:ecv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     APECO1_2078 (hsdS)
Prokaryotic defense system [BR:ecv02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   APECO1_2078 (hsdS)
SSDB
Motif
Pfam: Methylase_S PI3K_C2
Other DBs
NCBI-ProteinID: ABJ03859
UniProt: A0A0H2Z6H7
LinkDB
Position
complement(4970323..4971690)
AA seq 455 aa
MSAGKLPEGWEQIEIGDIADVISGGTPKSGVAENFAPSGEGVAWLTPADLSGYKEKYISH
GARDLTTLGYSSCSAKLMPKGTILFSSRAPIGYVAIAANEIATNQGFKSFAFPSDIFPDY
AYYFLRNIRHIAEEMGTGTTFKEISGSSAKTLPFVLVPFAEQKIIAEKLDTLLAQVDSTK
ARLEQIPQILKRFRQAVLGAAVRGKLTEDWRDNSSLSGWREGKLGEFIKKPSYGTSSKSN
KEGLIPVLRMGNLQGGKLDWTDLVYTSDTIEIEKYKLEYNDVLFNRTNSPELVGKTAIYK
SEQPAIYAGYLIRVQCLPDLNPDYLNYHLNSILGRQYCYSVKSDGVSQSNINAQKLIAYP
ITVPPLPEQAEIVRRVEQLFAYADTIEKQVNNALARVNNLTQSILAKAFRGELTAQWRAE
NPELISGENSAAALLEKIKAERAASGGKKASRKKS
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgagtgctgggaaattgccggaggggtgggaacagattgaaataggcgacattgctgat
gtcatctctggtgggacaccaaaatcgggagtcgctgaaaattttgcaccttcgggtgag
ggagtcgcctggcttacgcctgccgatttgagcggttataaagagaaatatatctcacat
ggtgccagagatttaactacactaggctattcctcttgttcagcaaaactaatgcccaaa
ggcactatactttttagtagccgggcaccgattggatatgttgctattgctgcaaatgag
attgcgactaaccagggtttcaaaagttttgcttttccttcagacatttttcctgattat
gcatattactttctccgcaacatcagacatattgcagaggaaatgggcacaggaacaact
tttaaagaaatttctggtagttctgcgaaaacattaccatttgttcttgtaccgtttgcc
gaacaaaaaatcatcgctgaaaaactcgatacgctgctggcacaggtagacagcaccaaa
gcacgtcttgagcaaatcccacaaatcctgaaacgttttcgtcaggcggttctgggtgca
gcggtgagaggaaaactaactgaagactggagagataattcaagcctgtctgggtggaga
gaaggcaaacttggggagtttataaaaaaaccaagttacggaacgtcatctaagtctaat
aaagaaggactcattcctgtattaagaatgggcaatcttcagggaggaaagttggactgg
acggatctagtctatacgtcagataccatagaaattgaaaagtataaacttgagtacaat
gatgtattattcaatcgtacaaatagtcctgaacttgtcgggaaaacagccatatataaa
tcagagcaaccagctatttatgcaggttatttgattagggttcaatgtttacctgattta
aaccctgactatcttaactaccatttaaatagcattttggggagacaatattgctattca
gttaaatctgatggggtcagtcaatcaaatattaatgcacagaaattaattgcataccca
ataactgttcccccccttcccgaacaagctgaaatcgttcgccgcgtcgagcaactcttc
gcctacgccgacacaatagaaaaacaggtcaacaacgccttagcccgcgtcaacaatctg
acgcaatccatcctggcaaaagcgttccgtggtgaactcaccgcccagtggcgggccgaa
aacccggaattaatcagcggtgaaaacagcgccgccgcgttgctggagaaaatcaaagct
gaacgcgcagccagcgggggtaaaaaagcctcgcgtaaaaagtcctga

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