Escherichia coli APEC O1 (APEC): APECO1_2348
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Entry
APECO1_2348 CDS
T00425
Symbol
phnF
Name
(GenBank) PhnF, putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation
KO
K02043
GntR family transcriptional regulator, phosphonate transport system regulatory protein
Organism
ecv
Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecv03000
]
APECO1_2348 (phnF)
Transcription factors [BR:
ecv03000
]
Prokaryotic type
Helix-turn-helix
GntR family
APECO1_2348 (phnF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
MarR
MarR_2
Rrf2
HTH_Crp_2
HTH_36
Cullin_Nedd8
HTH_11
HTH_DeoR
HTH_IclR
TrmB
DnaD_N
Linker_histone
HTH_Tnp_4
Penicillinase_R
FeoC
HTH_41
Motif
Other DBs
NCBI-ProteinID:
ABJ03589
UniProt:
A0A0H2Z5C1
LinkDB
All DBs
Position
complement(4668244..4668975)
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AA seq
243 aa
AA seq
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MAMHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAARFEVNRHTLRRAIDQ
LVEKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPTSEKLLSVLRPASGHVA
DALGITEGENVIHLRTLRRVNGVALCLIDHYFADLTLWPTLQRFDSGSLHDFLREQTGIT
LRRSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDGESSPAEYSVSLTRADIIEFT
MEH
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggctatgcacttgtctacacatccgaccagctacccaacacgctatcaggagatagcc
gcaaaacttgagcaggagcttcgtcaacactaccgctgcggcgactatcttcccgccgag
cagcaactggcggcgcgctttgaggtgaaccgccacaccctgcgccgcgccatcgaccaa
ctggtggaaaaaggctgggtacagcgccgtcagggcgtcggcgtactggtgctgatgcgc
ccgttcgattacccgctcaacgcccaggcgcgttttagccagaacctgctggaccagggc
agccatcccaccagcgaaaaattgctatcggtgctgcgccccgcctccggtcacgtcgct
gacgcgctggggataaccgagggggagaacgtcatccacctgcgcaccctgcgtcgggtc
aacggcgtcgcgctctgtttaatcgaccactactttgcggacctcaccctctggccgacg
ctgcaacgtttcgacagcggttcgctgcacgattttctgcgcgagcaaacggggattacg
ctacgacgcagccagacgcggatcagcgcccgccgcgcccaggccaaagagtgccagcgt
cttgaaatcccgaatatgtcgccgctgctgtgcgtgcgcacccttaaccaccgtgacggt
gaaagcagcccggcggagtactccgtcagcctgacgcgcgccgacataattgaattcact
atggagcactga
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