Escherichia coli APEC O1 (APEC): APECO1_2654
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Entry
APECO1_2654 CDS
T00425
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecv
Escherichia coli APEC O1 (APEC)
Pathway
ecv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APECO1_2654 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecv03019
]
APECO1_2654 (recQ)
03400 DNA repair and recombination proteins [BR:
ecv03400
]
APECO1_2654 (recQ)
Enzymes [BR:
ecv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APECO1_2654 (recQ)
Messenger RNA biogenesis [BR:
ecv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
APECO1_2654 (recQ)
DNA repair and recombination proteins [BR:
ecv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
APECO1_2654 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ABJ03280
UniProt:
A0A0H2Z4P7
LinkDB
All DBs
Position
4302868..4304703
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AA seq
611 aa
AA seq
DB search
MNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQ
IPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRL
LYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFM
ALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKS
GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGM
GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG
QLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQI
ALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIH
LGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAK
LRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMAL
IRAHVDGDDEE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtggcgcaggcggaagtgttgaatctggagtccggagctaaacaggttttacaa
gaaacctttggctaccaacagtttcgccccggccaggaagagattatcgacaccgtactt
tccggtcgcgattgcctggtcgtcatgcccactggtggcggaaaatccctttgctatcaa
atccctgccttattgctaaacggccttaccgtggttgtttcaccgctgatttccttgatg
aaagatcaggtggatcaactgcaagccaacggcgtggcggcggcgtgccttaactcgacg
caaacccgcgagcagcaacttgaagttatgacaggctgtcgcaccgggcaaatccgcctg
ctttatatcgcgccggaacgcctgatgctggataactttcttgagcatctggcgcactgg
aatccggtgttattagccgttgatgaagcgcactgtatctcccaatggggccacgatttc
cgcccggaatacgctgccctcggtcagctgcgtcagcgttttccgacgctgccgtttatg
gcgctgactgccaccgccgacgacaccacgcgccaggatatcgtgcgcctgctggggctg
aacgatccgctaattcaaatcagcagttttgaccgtccgaatattcgctacatgctgatg
gagaaattcaaaccgctcgatcagttgatgcgttatgtacaggaacaacgcggtaagtcg
gggattatttactgtaatagtcgtgcgaaagtagaagacaccgctgcgcgcctgcaaagc
aagggaattagcgcggcggcctatcatgccgggctggaaaataatgttcgcgctgatgtg
caggaaaaattccagcgcgatgacctgcaaattgtggtggcgacggtggcgttcggcatg
ggcatcaacaagcctaacgttcgcttcgtggtgcattttgatattccgcgcaatatcgaa
tcctattatcaggaaactggacgcgccgggcgtgatggcctgcccgcggaagcgatgctg
ttttacgatccggctgatatggcgtggctgcgccgttgtctggaagagaagccgcagggg
cagttgcaggatatcgaacgtcataaactcaatgcgatgggcgcgtttgccgaagcgcaa
acttgtcgtcgtttggtattgctgaactattttggcgaagggcgtcaggagccgtgcggg
aactgcgatatctgcctcgatccgccgaaacagtacgacggttcaaccgatgctcagatt
gccctttccaccattggtcgtgtgaatcagcggtttgggatgggttatgtggtggaagtg
attcgcggtgctaataaccagcgtatccgcgactatggtcatgacaaactgaaagtctat
ggcatgggccgtgataaaagccatgaacattgggtgagcgtgatccgccagctgattcac
ctcggcctggtgacgcaaaatattgcccagcattctgccctacaactgacagaggctgcg
cgtccggtgctgcgcggcgaatcctctttgcaacttgccgtgccgcgtatcgtggcgctc
aaaccgaaagcgatgcagaaatcgttcggcggcaactatgatcgcaaactgttcgccaaa
ttacgcaaactgcgtaaatcgattgccgatgaaagcaatgtcccgccgtacgtggtgttt
aacgacgcaaccttgattgagatggcggagcagatgccgatcaccgccagcgaaatgctc
agcgttaacggcgttggtatgcgcaagctggaacgctttggcaaaccgtttatggcgctg
attcgtgcgcatgtcgatggtgacgacgaagagtag
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