Escherichia coli APEC O1 (APEC): APECO1_2691
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Entry
APECO1_2691 CDS
T00425
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ecv
Escherichia coli APEC O1 (APEC)
Pathway
ecv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APECO1_2691 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecv03021
]
APECO1_2691 (rho)
03019 Messenger RNA biogenesis [BR:
ecv03019
]
APECO1_2691 (rho)
Transcription machinery [BR:
ecv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
APECO1_2691 (rho)
Messenger RNA biogenesis [BR:
ecv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
APECO1_2691 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ABJ03242
UniProt:
A0A0H2Z4W7
LinkDB
All DBs
Position
4259136..4260467
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AA seq
443 aa
AA seq
DB search
MDDPAIPFTTLSSRFTPSLRTHTTMNLTELKNTPVSELITLGENMGLENLARMRKQDIIF
AILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDT
ISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTED
LTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEV
TEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFK
GTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAM
EFLINKLAMTKTNDDFFEMMKRS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcctgccataccattcacaacattaagttcgagatttaccccaagtttaaga
actcacaccactatgaatcttaccgaattaaagaatacgccggtttctgagctgatcact
ctcggcgaaaatatggggctggaaaacctggctcgtatgcgtaagcaggacattattttt
gccatcctgaagcagcacgcaaagagtggcgaagatatctttggtgatggcgtactggag
atattgcaggatggatttggtttcctccgttccgcagacagctcctacctcgccggtcct
gatgacatctacgtttcccctagccaaatccgccgtttcaacctccgcactggtgatacc
atctctggtaagattcgcccgccgaaagaaggtgaacgctattttgcgctgctgaaagtt
aacgaagttaacttcgacaaacctgaaaacgcccgcaacaaaatcctctttgagaactta
accccgctgcacgcaaactctcgtctgcgtatggaacgtggtaacggttctacggaagat
ttaaccgctcgcgtactggatctggcatcacctatcggtcgtggtcagcgtggtctgatt
gtggcaccgccgaaagccggtaaaaccatgctgctgcagaacattgctcagagcattgct
tacaaccacccggattgtgtgctgatggttctgctgatcgacgaacgtccggaagaagta
accgagatgcagcgtctggtaaaaggtgaagttgttgcttctacctttgacgaacccgca
tctcgccacgttcaggttgcggaaatggtgatcgagaaggcgaaacgcctggttgagcac
aagaaagacgttatcattctgctcgactccatcactcgtctggcgcgcgcttacaacacc
gttgttccggcgtcaggtaaagtgttgaccggtggtgtggacgccaacgccctgcatcgt
ccgaaacgcttcttcggtgcggcgcgtaacgtggaagagggcggcagcctgaccattatc
gcgacggcgcttatcgataccggttctaaaatggacgaagttatctacgaagagtttaaa
ggtacaggcaacatggaactgcacctctctcgtaagatcgctgaaaaacgcgtcttcccg
gctatcgactacaaccgttccggtacccgtaaagaagagctgctcacgactcaggaagaa
ctgcagaaaatgtggatcctgcgcaaaatcattcacccgatgggcgaaatcgatgcaatg
gaattcctcattaataaactggcaatgaccaagaccaatgacgatttcttcgaaatgatg
aaacgctcataa
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