Escherichia coli APEC O1 (APEC): APECO1_2837
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Entry
APECO1_2837 CDS
T00425
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ecv
Escherichia coli APEC O1 (APEC)
Pathway
ecv00541
Biosynthesis of various nucleotide sugars
ecv01100
Metabolic pathways
ecv01250
Biosynthesis of nucleotide sugars
Module
ecv_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
APECO1_2837 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecv01005
]
APECO1_2837 (rfaD)
Enzymes [BR:
ecv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
APECO1_2837 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ecv01005
]
Core region
APECO1_2837 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
ABJ03095
UniProt:
A1AHF5
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All DBs
Position
4087276..4088208
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLIQI
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggaagcaacatcgttaaagccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtg
aacctggtggatctggatatcgcggactatatggataaggaagacttcctgatccagatt
atggctggcgaagagttcggcgatgtcgaagcgattttccacgaaggcgcgtgctcttcc
accaccgagtgggacggcaagtatatgatggataacaactatcaatactccaaagagctg
ctgcactactgtctggagcgcgaaatcccgttcctgtatgcctcttccgcagccacttac
ggtggacgcacctccgactttattgaatcccgcgaatatgaaaaaccgttgaatgtctac
ggttactcaaaattcctgtttgatgaatatgttcgccaaatcctgcctgaagcgaactca
cagattgttggcttccgttatttcaacgtttatggaccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctcaacacccagcttaataacggtgaatcaccgaagctg
ttcgaaggtagcgagaactttaaacgtgacttcgtctatgtgggcgacgtggcagatgta
aacctgtggttcctggaaaatggcgtttccggcatcttcaacctcggcaccggtcgtgcg
gaatccttccaggcagtagcagatgctacgcttgcttatcacaagaaaggccaaatcgaa
tacattccgttcccggataaactgaaaggccgctaccaggcgttcactcaggcagatctg
acgaatctgcgcgcggcgggttacgataaaccgttcaaaaccgttgccgaaggcgtaacg
gaatacatggcctggctgaatcgtgacgcataa
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