Escherichia coli APEC O1 (APEC): APECO1_2883
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Entry
APECO1_2883 CDS
T00425
Symbol
xylF
Name
(GenBank) ABC-type xylose transport system, periplasmic component XylF
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ecv
Escherichia coli APEC O1 (APEC)
Pathway
ecv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
APECO1_2883 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecv02000
]
APECO1_2883 (xylF)
Transporters [BR:
ecv02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
APECO1_2883 (xylF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Phage_sheath_1C
Motif
Other DBs
NCBI-ProteinID:
ABJ03048
UniProt:
A0A0H2Z438
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All DBs
Position
4029777..4030769
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AA seq
330 aa
AA seq
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MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV
QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD
IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK
IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA
ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV
PSRLLTPIDVNKNNIKDTVVKDGFHKESEL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaagaacattctactcaccctttgcacctcacttctgcttaccaacgttgcg
gcacacgccaaagaagtcaaaataggtatggcgattgatgatctccgtcttgaacgctgg
caaaaagatcgagatatttttgtgaaaaaagcagaatctctcggcgcgaaagtatttgta
cagtctgcaaatggcaatgaagaaacacaaatgtcgcagattgaaaacatgattaaccgg
ggtgtcgatgttcttgtcattattccttataacggtcaggtattaagtaacgttgtaaaa
gaagccaaacaagaaggtattaaagtattagcttacgaccgtatgattaacgatgcggat
atcgatttttatatttctttcgataatgaaaaagtcggtgaactgcaggcaaaagccctg
gtcgatattgttccgcaaggtaattacttcctgatgggcggctcgccggtagataacaac
gccaagctgttccgcgccgggcaaatgaaagtattaaaaccttatgttgattccggaaaa
attaaagtcgttggtgaccaatgggttgatggctggttaccggaaaacgcattgaaaatt
atggaaaacgcgctaaccgccaataataacaaaattgatgctgtagttgcctcaaacgat
gccaccgcaggaggggcaattcaggcattaagcgcgcaaggtttatcagggaaagtagca
atttccggccaggatgcggatcttgcaggtattaaacgtattgctgccggtacgcaaact
atgacggtgtataaacctattacattgttggcaaatactgccgcagaaattgccgttgag
ttgggcaatggtcaggagccaaaagcggataccacactgaataatggcctgaaagatgtt
ccctcccgcctgctgacaccgatcgatgtgaataaaaacaacatcaaagatacggtagtt
aaagacggattccacaaagagagcgagctgtaa
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