Escherichia coli APEC O1 (APEC): APECO1_3164
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Entry
APECO1_3164 CDS
T00425
Symbol
yrdC
Name
(GenBank) putative ribosome maturation factor
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
ecv
Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecv03009
]
APECO1_3164 (yrdC)
03016 Transfer RNA biogenesis [BR:
ecv03016
]
APECO1_3164 (yrdC)
Enzymes [BR:
ecv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
APECO1_3164 (yrdC)
Ribosome biogenesis [BR:
ecv03009
]
Prokaryotic type
Other maturation factors
APECO1_3164 (yrdC)
Transfer RNA biogenesis [BR:
ecv03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
APECO1_3164 (yrdC)
Prokaryotic type
APECO1_3164 (yrdC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
ABJ02764
UniProt:
A1AGH4
LinkDB
All DBs
Position
complement(3721559..3722176)
Genome browser
AA seq
205 aa
AA seq
DB search
MPVNNVESRFRRNNNVNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMR
LLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPATTPR
WLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVV
PGETGGRLNPSEIRDALTGELFRQG
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgccagtaaacaatgtggaaagccgatttcggcggaataataacgtgaataataacctg
caaggagacgctatcgcagctgcgatagatgtcctcaatgaagaacgtgtcatcgcctat
ccaacggaagccgttttcggtgtcgggtgcgatcctgatagcgaaacagcagtgatgcga
ctgttggagttaaaacagcgtccggttgataaggggctgattctaatcgccgcaaattac
gagcagcttaaaccctatattgatgacaccatgctgactgacgcgcagcgtgaaactata
ttttctcgctggccaggtcctgtcacctttgtttttcccgcgcctgcgacaacaccgcgc
tggttgacgggccgctttgattcgcttgctgtacgagtcaccgaccatccgttggtggtt
gctttgtgccaggcttatggtaaaccgctggtttctaccagtgccaacttgagtggattg
ccaccttgtcgaacagtagacgaagttcgcgcacaatttggcgcggcgttcccggttgtg
cctggtgaaacgggggggcgtttaaatccttcagaaatccgcgatgccctgacgggtgaa
ctgtttcgacaggggtaa
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