Escherichia coli APEC O1 (APEC): APECO1_3237
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Entry
APECO1_3237 CDS
T00425
Symbol
yrbI
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
ecv
Escherichia coli APEC O1 (APEC)
Pathway
ecv00541
Biosynthesis of various nucleotide sugars
ecv01100
Metabolic pathways
ecv01250
Biosynthesis of nucleotide sugars
Module
ecv_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
APECO1_3237 (yrbI)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecv01005
]
APECO1_3237 (yrbI)
Enzymes [BR:
ecv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
APECO1_3237 (yrbI)
Lipopolysaccharide biosynthesis proteins [BR:
ecv01005
]
Lipid A
APECO1_3237 (yrbI)
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GFIT
Motif
Pfam:
Hydrolase_3
Hydrolase
S6PP
HAD_2
Motif
Other DBs
NCBI-ProteinID:
ABJ02689
UniProt:
A0A0H2Z3C2
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All DBs
Position
3634863..3635429
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AA seq
188 aa
AA seq
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MSKAGASLATCYGPVSADVMAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY
GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENV
AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL
DEAKGQSI
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcaggtgcgtcgcttgcgacctgttacggccctgtcagcgccgacgttatg
gcaaaagcagagaacattcgtctgctgatcctcgacgttgatggcgtactgtcagatggc
ctgatttatatgggcaataacggcgaagagctgaaagcgttcaatgttcgtgacggttat
ggcattcgttgtgcgctcacctctgatattgaagtcgctatcattaccgggcgaaaggct
aaactggtagaagatcgttgtgccacattggggatcactcacttgtatcaggggcagtca
aacaaactgatcgcctttagcgatctgctggaaaaactggcgattgccccggaaaatgtg
gcttatgtcggcgatgatctcatcgactggccggtaatggaaaaagtgggtttaagcgtc
gccgtggccgatgcgcatccactgttgatcccgcgcgccgattacgtgacgcgcattgct
ggcggtcgtggcgcagtgcgagaagtttgcgacttattactcctggcgcagggcaaactg
gatgaagccaaagggcaatcgatatga
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