Escherichia coli APEC O1 (APEC): APECO1_3306
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Entry
APECO1_3306 CDS
T00425
Symbol
tdcA
Name
(GenBank) transcriptional activator of tdc operon
KO
K07592
LysR family transcriptional regulator, tdc operon transcriptional activator
Organism
ecv
Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecv03000
]
APECO1_3306 (tdcA)
Transcription factors [BR:
ecv03000
]
Prokaryotic type
Helix-turn-helix
LysR family
APECO1_3306 (tdcA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_3
Stonustoxin_helical
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABJ02620
UniProt:
A0A0H2Z377
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Position
complement(3564933..3565871)
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AA seq
312 aa
AA seq
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MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTG
VTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFK
EVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKS
RTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNA
DFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSY
NGCRRRQLIEVD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcactattcttcttccgaaaacgcagcacctggtagtctttcaggaagttattaga
agtggttctatcggctcggctgcaaaagagttagggttaactcaaccggccgtcagtaaa
atcattaacgatattgaagattattttggtgtggagttagtggtgcggaaaaataccggt
gtaacattaacacctgccggtcaattgttactctcccgttccgaatccattacccgtgaa
atgaaaaatatggttaatgagataagcggtatgtcttctgaggcggtggtggaagtctca
tttggttttccttcattgattggttttacttttatgtcagggatgatcaacaagttcaaa
gaggtgttcccgaaagcgcaggtttctatgtatgaagcgcaactgtcttcgttcttaccg
gcaatccgcgacggccgactggattttgcgattggtacgttaagcgcagaaatgaagctt
caggatttacatgttgagccgctgttcgagtccgagtttgtgctggtagccagtaagtcc
cgaacatgcaccggcaccaccacgctggagtcgttgaagaacgaacagtgggtgttgcca
caaaccaatatggggtactacagcgaactacttactacgttacaaagaaatggcatcagt
attgaaaacatcgttaaaaccgactcagtcgtgacaatttataatcttgttctcaatgct
gatttcttaactgtaattccttgtgatatgacatcaccttttggttctaatcaatttatt
actattccggttgaagaaacattacctgtggcacaatatgccgcggtatggtcgaaaaat
tatcgtattaaaaaagcagcatcggttttggtggaattagccaaagagtattcatcttat
aatgggtgtagacgaaggcaattaattgaagttgattag
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