Escherichia coli APEC O1 (APEC): APECO1_3454
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Entry
APECO1_3454 CDS
T00425
Symbol
yghJ
Name
(GenBank) putative lipoprotein AcfD-like precursor
KO
K10939
accessory colonization factor AcfD
Organism
ecv
Escherichia coli APEC O1 (APEC)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
Neisseria_TspB
Motif
Other DBs
NCBI-ProteinID:
ABJ02472
UniProt:
A0A0H2Z2R0
LinkDB
All DBs
Position
complement(3391077..3395639)
Genome browser
AA seq
1520 aa
AA seq
DB search
MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPSVDSGSGTLPEVKPDPTPTPEPTP
EPTPDPEPTPDPTPDPEPTPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFTPG
NTVSCVVGSTTIATFNTQSEAARSLRAVDKVSFSLEDAQELANSENKKTNAISLVTSSDS
CPADAEQLCLTFSSVVDRARFEKLYKQIDLATDNFSKLVNEEVENNAATDKAPSTHTSTV
VPVTTEGTKPDLNASFVSANAEQFYQYQPTEIILSEGQLVDSLGNGVAGVDYYTNSGRGV
TDENGKFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQ
NNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLDEGDQNVVLPNEFIEQFKTGQAKEI
DTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYQSVSKFHVFHDSTNFYG
STGNARGQAVVNISNSAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVQPENVT
RDTATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWGGGVNSKGECTLSGDSDDM
KHFMQNVLRYLSNDIWQPNTKSIMTVGTNLENVYFKKAGQVLGNSAPFAFHEDFTGITVK
QLTSYGDLNPEEIPLLILNGFEYVTQWSGDPYAVPLRADTSKPKLTQQDVTDLIAYLNKG
GSVLIMENVMSNLKEESASSFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRATGIWV
YERYPAADGAQPPYTIDPNTGEVTWKYQQDNKPDDKPKLEVASWQEEVEGKQVTRYAFID
EAEYTTEESLEAAKAKIFEKFPGLQECKDSTYHYEINCLERRPGTDVPVTGGMYVPRYTQ
LNLDADTAKAMVQAADLGTNIQRLYQHELYFRTKGSKGERLNSVDLERLYQNMSVWLWND
TKYRYEEGKEDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDGSSKAGM
MNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGSVSAKGESVTENISLYSNPTKWF
AGNMQSTGLWAPAQQDVTIKSSASVPVTVTVALADDLTGREKHEVALNRPPRVTKTYTLE
ANGEVTFKVPYGGLIYIKGDSKDDVSANFTFTGVVKAPFYKDGEWKNDLDSPAPLGELES
ASFVYTTPKKNLEASNFTGGVAEFAKDLDTFASSMNDFYGRNDEDGKHRMFTYKNLTGHK
HRFTNDVQISIGDAHSGYPVMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLNVPGA
TEVANNVLALYMQDRYLGKMNRVADDITVAPEYLDESNGQAWARGGAGDRLLMYAQLKEW
AEENFDIKQWYPDGELPKFYSDRKGMKGWNLFQLMHRKARGDDVGNSTFGGKNYCAESNG
NAADTLMLCASWVAQADLSEFFKKWNPGASAYQLPGATEMSFQGGVSSSAYSTLASLKLP
KPEKGPETINKVTEHKMSAE
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaatttaaatataagaaatcgcttttagcggctattttaagcgcaaccctg
ttagccggttgtgatggtggtggttcaggatcgtcctccgatacgccgtctgtagattct
ggatcagggactttgccggaagtgaaacccgatccaacaccaaccccggagccgacacct
gagccgacgccggacccagaacctacgccggatccaacacctgatcctgagccgacacca
gaaccggagccagaacctgttcctacgaaaacgggttatctgaccctgggcggaagccag
cgggtaactggtgctacctgtaatggtgaatccagcgatggctttacctttacgccaggc
aataccgtgagttgtgtggtgggcagtacgaccattgcaacattcaacacccagtcagaa
gctgcgcgtagcctgcgtgcggttgacaaagtgtcgtttagcctggaggacgcgcaggag
ctggcgaattctgaaaataagaaaaccaacgccatctctctggtgacgtccagcgacagt
tgccccgcagatgcagaacagctttgtcttactttctcgtcagtggttgatcgcgcgcga
tttgaaaaactgtataagcaaattgatctggcaacagacaatttcagcaagctggtcaat
gaagaggtggaaaacaatgctgcgactgataaagcgccgtccacccatacctcaacggta
gtgccagtcacgacagagggaacaaaaccggatctgaacgcgtccttcgtgtcggctaac
gcggaacagttttatcagtatcaacccactgaaatcattctttccgaaggccaactggtg
gatagcctggggaacggtgttgctggcgttgactactacaccaattcaggccgtggcgta
actgacgaaaacggtaaattttcctttagctggggcgaaaccatctcctttggtatcgat
acctttgaactgggctcagtacgtggcaataagtcgaccattgcgctgactgaattgggt
gatgaagttcgcggggcaaatatcgatcagctcattcatcgttattcgacgactggtcaa
aataatactcgtgttgttccggacgatgtacgcaaggtctttgccgaatatcccaacgtg
atcaacgagataatcaatctttcgttatccaacggtgcgacgctggatgaaggcgatcaa
aacgttgtgctgcctaacgaatttatcgagcagtttaagacgggtcaggccaaagagatc
gataccgcgatttgtgcgaaaaccgacggttgtaacgaggctcgctggttctcgctgaca
acgcgcaatgttaatgacggccagattcagggcgttattaacaagctgtggggcgtggat
acgaactatcagtctgtcagcaagttccacgtcttccatgactctaccaacttctatggc
agcaccggtaacgcgcgcggtcaggcggtggtaaatatctccaactcggcattcccgatt
ctgatggcgcgtaatgataaaaactactggctggcgtttggcgaaaaacgcgcctgggat
aaaaatgagctggcgtacattacggaagcgccttccattgtgcagccagagaacgttacg
cgcgatactgcgactttcaacctgccgtttatttcgctggggcaagtcggtgaaggcaaa
ctgatggttatcggtaacccgcactacaacagcatcctgcgttgcccgaacggttacagt
tggggcggtggtgttaatagtaaaggtgagtgtacgctcagcggtgattctgatgacatg
aagcactttatgcagaacgtactgcgctacttgtcaaatgacatctggcagccaaatacc
aagagcatcatgactgtcggcaccaacctggagaacgtttatttcaaaaaagcgggccag
gtattgggaaatagtgcaccatttgctttccatgaggatttcactggtatcacggttaaa
cagttgaccagctatggcgatctgaatccggaagagattccgttgctgatcctcaacggc
tttgaatatgtgactcagtggtctggcgatccctatgctgtgcctctgcgtgcagatacc
agcaaaccgaagctgactcagcaggatgtgaccgatctgatcgcttatctgaacaaaggt
ggctcggtgctgatcatggaaaacgtgatgagcaatcttaaggaagagagcgcgtccagt
tttgtgcgtctgctggatgccgcgggtctgtcaatggctctgaacaaatcggtggtgaac
aacgatccgcaagggtatccggatcgcgttcgtcagcgtcgcgcgactggcatttgggtt
tatgaacgttatcctgctgcagacggcgcgcaaccgccgtacaccatcgacccaaataca
ggggaagtgacctggaaataccagcaagacaacaagcctgatgacaagccgaaactggaa
gttgcgagctggcaggaggaagttgagggcaaacaggtaacgcgttatgcctttattgat
gaagcggaatacacaacagaagaatctctggaagcggcaaaggcaaaaatctttgagaag
tttcctgggttacaggagtgtaaggactcgacttaccattacgagattaactgtttggag
cgccgcccaggcacggatgttccggtaacaggtggcatgtatgttccgcgctatacgcaa
ctgaatcttgacgccgacaccgcgaaagcgatggtgcaggcggcggatttaggcaccaac
attcagcgcctgtatcagcatgagctttatttccgtaccaaaggcagtaaaggtgagcgt
ctgaacagtgttgatctggaacgtctgtaccagaacatgtcggtctggctgtggaacgat
acgaaatatcgttacgaagagggcaaggaagatgagctgggctttaaaacgttcaccgag
ttcctgaactgctacgccaatgatgcctatgcaggcggcaccaagtgctccgcagatctg
aaaaaatcgctggtcgataacaacatgatctacggtgacggtagcagcaaagcgggcatg
atgaacccaagctatccgctcaactatatggaaaaaccgctgacgcgtctgatgctgggc
cgttcctggtgggatctgaacattaaggttgatgtggagaagtacccaggatccgtatcg
gcaaagggtgagagcgttacggaaaacatcagcctgtactcgaatccgaccaaatggttt
gcgggtaacatgcagtcaaccggcctgtgggcaccggcccagcaggacgtcaccattaag
tcttcggcgtcagtcccagtgactgttaccgtggcgctggctgacgacctgactggacgt
gagaagcatgaagttgcgctgaaccgtccgccaagagtgactaaaacgtatactctggag
gctaacggtgaagtgaccttcaaggtgccttatggtggtctgatttatatcaagggcgac
agtaaggatgatgtttctgctaacttcacctttaccggtgtagtaaaagcgccgttctat
aaagacggcgaatggaaaaacgatctggactcaccggcgccgctgggcgagctggagtct
gcgtcgttcgtctataccacgccgaagaagaaccttgaggccagcaatttcactggtggt
gtagcagaattcgctaaagatctggatacctttgccagctcgatgaatgacttctacggt
cgtaatgatgaagacggtaagcaccggatgtttacctataaaaacttgacggggcacaag
catcgtttcaccaacgatgtgcagatctccatcggtgatgcgcactcgggttatccggta
atgaacagcagcttctcgacgaacagcaccacgctgccgacgacgccgctgaacgactgg
ctgatttggcacgaagtcggtcataacgctgcagaaacaccgctgaacgtaccgggtgca
actgaagtggcgaacaacgtgctggcgctgtacatgcaggatcgctatctcggtaagatg
aaccgtgtcgctgacgacattaccgtcgcgccggaatatctggacgagagcaacggtcag
gcctgggcgcgcggcggtgcgggtgaccgtctgctgatgtacgcacagttgaaggagtgg
gcagaggaaaactttgatatcaaacagtggtatccagatggtgagctgcctaagttctac
agcgatcgtaaagggatgaagggctggaacctgttccagttgatgcaccgtaaagcgcgc
ggcgatgatgttggtaacagcacctttggtggcaagaattactgtgctgaatccaatggt
aacgctgccgacacgctgatgctgtgtgcatcctgggtcgctcaggcggatctttcggaa
ttctttaagaaatggaatccgggtgcaagtgcttaccagttgccgggagcaacggagatg
agtttccagggcggtgtgagctcttcggcttacagcacgctggcgtcactcaagctgccg
aaaccggaaaaagggccggaaaccattaacaaggttaccgagcataagatgtctgccgag
taa
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integrated database retrieval system
