Escherichia coli APEC O1 (APEC): APECO1_3635
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Entry
APECO1_3635 CDS
T00425
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ecv
Escherichia coli APEC O1 (APEC)
Pathway
ecv03410
Base excision repair
ecv03430
Mismatch repair
ecv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
APECO1_3635
03430 Mismatch repair
APECO1_3635
03440 Homologous recombination
APECO1_3635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecv03400
]
APECO1_3635
DNA repair and recombination proteins [BR:
ecv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
APECO1_3635
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
APECO1_3635
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
APECO1_3635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
ABJ02322
UniProt:
A0A0H2Z2C9
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All DBs
Position
complement(3232134..3233726)
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AA seq
530 aa
AA seq
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MLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLV
PNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDT
LPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLD
LVALGTVADVVPLDANNRILTWQGMSRIRAGKCRPGIKALLEVANRDPQKLAASDLGFAL
GPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQVEALTLCEKL
ERSRDTLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLH
MRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVV
SDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGG
PLLDGIAFNVDTALWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgctgccctggcagcaactgagcggcgtcgaaaaggccgttgagatcctttacaacgct
tttcgcgaaggcacgcggattattgtggtcggtgatttcgacgccgacggtgccaccagc
acggctctaagcgtgctggcgatgcgctcgcttggttgcagcaatatcgactacctggtt
ccaaaccgtttcgaagacggttacggcttaagcccggaagtagtcgatcaggctcatgcc
cgtggcgcgcagttaattgtcacggtggataacggtatttcctcccatgcgggggttgaa
cacgctcgttcgttgggcattccggttattgttaccgatcaccatttgccaggcgacaca
ttacccgcagcggaagcgatcattaaccctaacttgcgcgactgtaatttcccgtcgaaa
tcactggcaggcgtgggtgtggcgttttatctgatgctggcgctgcgcacctttttgcgc
gatcagggctggtttgatgagcgcggcatcgcaattcctaatctggcagaactgctggat
ctggtagcgttggggacagtggcggacgtcgtgccgctggacgctaataatcgcattctg
acctggcaggggatgagtcgcatccgtgccggaaagtgccgtccggggattaaagcgctg
ctggaagtggccaatcgcgatccacaaaaactcgccgccagcgatttaggttttgcgctg
gggccacgtctcaatgctgccgggcgactggacgatatgtccgttggcgtggcgctgttg
ctgtgcgacaacatcggcgaagcgcgcgtgctggcaaatgaactcgatgcgctaaaccag
acgcgaaaagagatcgaacagggaatgcaagttgaagccctgaccttgtgcgagaaactg
gagcgcagccgcgacacgctacccggcgggctggcaatgtatcaccccgaatggcatcag
ggcgttgttggcattctggcatcgcgtatcaaagagcgttttcaccgtccggttatcgcc
tttgcgccagctggtgatggtacgctgaaaggttccggtcgctccattcaggggctgcat
atgcgtgatgcgctggagcgattagacacactctaccccggcatgatgctcaagtttggc
ggtcatgcgatggcggcgggtttgtcgctggaagaggataaattcgaactctttcaacaa
cggtttggcgaactggttacggagtggttggacccttcgctattgcaaggcgaagtggtg
tcggacggtccgttaagtccggccgaaatgaccatggaagtggcgcagctgttgcgcgat
gctggcccgtgggggcagatgttcccggagccgctgtttgacggtcattttcgtctgctg
caacagcggctggtgggcgaacgtcatttgaaagtcatggtcgaaccggtcggcggcggt
ccactgctggacgggattgcttttaatgtcgataccgccctctggccggataacggtgtg
cgcgaagtgcaactggcttacaagctcgatatcaacgagtttcgcggcaaccgcagcctg
caaattatcatcgacaatatctggccaatttag
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