Escherichia coli APEC O1 (APEC): APECO1_3819
Help
Entry
APECO1_3819 CDS
T00425
Symbol
srlR
Name
(GenBank) DNA-binding transcriptional repressor
KO
K02468
DeoR family transcriptional regulator, glucitol operon repressor
Organism
ecv
Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecv03000
]
APECO1_3819 (srlR)
Transcription factors [BR:
ecv03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
APECO1_3819 (srlR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
HTH_5
HVO_A0114
HTH_20
Put_DNA-bind_N
FeoC
MarR_2
HTH_Mga
GntR
HTH_AsnC-type
FokI_D3
HTH_24
HTH_IclR
FaeA
Motif
Other DBs
NCBI-ProteinID:
ABJ02137
UniProt:
A0A0H2Z1T0
LinkDB
All DBs
Position
3002607..3003380
Genome browser
AA seq
257 aa
AA seq
DB search
MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNK
EESDPPIDHKTLINTHKKELIAEAAVGFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMT
NSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNA
GVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQ
ALEEKGIDVIITGESNE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcgtcagcgtcaggccgccattctggagtatctacaaaagcagggtaaatgc
tcggttgaagaattggcgcaatactttgacaccacaggcacaaccattcgcaaagatctg
gtcattctggaacatgccggaaccgtcattcgtacttatggcggcgtggtgttgaacaaa
gaggaatccgatccgcctatcgatcataaaacgcttatcaacacccacaaaaaagagctg
attgcagaagctgccgttggttttattcatgatggcgactcaataattcttgatgctggc
agtaccgtgttgcagatggtgcccctgctctcgcgctttaataacatcacggtgatgacc
aacagcctgcacatcgtcaatgcgctatccgaactggataacgaacaaactatactgatg
ccaggcggaacatttcgcaaaaaatcggcctcatttcacgggcaactggcagagaatgcc
ttcgagcatttcaccttcgataaattgtttatgggcaccgacggcatcgatctcaatgcg
ggcgtaaccacctttaacgaggtctataccgtcagtaaggcgatgtgtaatgccgcgcgc
gaagtgattttgatggctgactcatcgaagtttggtcgtaaaagccccaacgtggtttgt
agtcttgaaagcgtcgataagctgattaccgacgcaggtatcgatccagcgtttcgtcag
gcgctggaagaaaaagggatcgacgtgatcataaccggagagagcaatgagtga
DBGET
integrated database retrieval system
