KEGG   Escherichia coli APEC O1 (APEC): APECO1_67
Entry
APECO1_67         CDS       T00425                                 
Symbol
helD
Name
(GenBank) HelD
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
ecv  Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:ecv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecv03400]
    APECO1_67 (helD)
Enzymes [BR:ecv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     APECO1_67 (helD)
DNA repair and recombination proteins [BR:ecv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    APECO1_67 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 DEAD AAA_11
Other DBs
NCBI-ProteinID: ABJ00371
UniProt: A0A0H2YXN3
LinkDB
Position
1020666..1022813
AA seq 715 aa
MGGNCNVFLGWSTFSLTVTLIRNNFVWIYRVMELKATTLGKRLAQHPYDRAVILNAGIKV
SGDRHEYLIPFNQLLAIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWR
RWSGEMSEIASGVLRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEF
DNCREVWRKCQAWLKDIEGARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGE
HSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMHERIRERLHTED
ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWL
TEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRI
KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAAL
LAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGDRCDLDTTYRFNSRIG
EVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDEGQLDALLDKLSGYAKPEERILILARY
HHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEA
LLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVDILKNLDVPVARKP
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgggcggcaattgtaacgtttttttgggctggagcacgttttctctgacggttacactg
ataagaaataatttcgtgtggatctacagagtcatggaactgaaagcgacaacgcttgga
aaacgtctggcacagcacccttacgatcgggcggtgatcctcaatgccgggattaaagtc
tccggcgatcgccacgaataccttattcctttcaatcaattactggcgattcactgtaag
cgcggtctggtatggggcgagctggaatttgtactgccggacgaaaaagtggtgcgtctg
cacggcaccgaatggggcgagacgcagcgtttttaccatcatcttgatgctcactggcgg
cggtggagtggcgagatgagcgaaattgcgtctggcgttttacgtcagcaactggatttg
attgccacgcgcaccggagaaaataaatggctgacgcgtgagcaaacctctggcgtgcag
caacaaatccgccaggctttgtcggcgttaccattgccggttaaccgactggaagaattc
gataactgccgtgaggtgtggcgtaaatgtcaggcctggttgaaggacattgaaggcgct
cggttgcagcataatcaggcgtataccgaagccatgcttaccgagtatgcggattttttc
cgccaggtcgagtcttcaccgctgaatccggcgcaggcccgggcagtcgttaatggcgag
cattctctgttagtgctggcaggtgcaggaagcggaaaaacgtcggtgctggtggcccgt
gctggctggttactggcgcgtggtgaagcgtcccctgagcaaattttattgctggcgttt
ggtcgcaaagccgctgaagagatgcacgagcgtattcgagaacgactacataccgaagac
attaccgcacgcacgtttcatgcgctggcgctgcatattattcagcagggcagcaaaaaa
gttccgatagtcagcaaactggaaaatgataccgctgcccgtcatgaactttttattgct
gagtggcgcaagcaatgcagcgaaaagaaagcgcaggcgaagggctggcggcaatggctg
acggaagaaatgcagtggtcagtgccagaaggtaatttctgggatgatgaaaaattacag
cgtcgtcttgcctctcgcctcgatcgctgggtaagtctgatgcggatgcacggtggtgca
caggcagaaatgattgccagtgcacccgaagagattcgcgatctgttcagtaaacgtatc
aagttgatggccccgttattaaaagcctggaaaggtgcgctgaaggcagaaaacgctgtc
gatttttcgggccttattcaccaggcgattgtgattctggagaaaggtcgctttatcagc
ccgtggaagcatattctggttgatgaatttcaggatatctcgccgcagcgtgcagcgttg
ttagcggcattacgcaagcaaaatagtcaaacgacgttgttcgctgttggtgatgactgg
caggcgatttaccgattcagcggtgcgcaaatgtcgcttaccacggctttccatgaaaac
tttggtgaaggtgatcgctgtgatttagacacgacctaccgttttaacagtcgtatcggt
gaggtggcaaacaggtttattcagcagaacccaggccagcttaaaaagccgctaaacagc
ttaaccaatggagacaaaaaagccgtcacgttattggatgagggtcaacttgacgctttg
ctggataaactctctggttatgccaaaccggaagagcgcattctgatcctggcgcgttac
catcacatgaggcctgccagcctggaaaaagcagcaacacgctggccgaagttgcaaatc
gactttatgaccattcatgccagcaaagggcaacaggcggattacgtcatcatcgttggc
ttgcaggaggggagtgatggttttccggctgcggcgcgggagtcgattatggaagaggcg
ctactgccaccggttgaggatttcccggacgctgaagaacggcggttaatgtacgtggcg
ctgacccgggcacgtcatcgggtatgggcactgtttaacaaagagaatccctctcccttt
gtggatatactgaaaaatctggatgtgccggtggcgagaaaaccgtaa

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