Escherichia coli APEC O1 (APEC): APECO1_872
Help
Entry
APECO1_872 CDS
T00425
Symbol
yoaD
Name
(GenBank) conserved hypothetical protein
KO
K21090
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ecv
Escherichia coli APEC O1 (APEC)
Pathway
ecv02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
APECO1_872 (yoaD)
Enzymes [BR:
ecv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
APECO1_872 (yoaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
MSC
Motif
Other DBs
NCBI-ProteinID:
ABJ01173
UniProt:
A0A0H2Z045
LinkDB
All DBs
Position
1906332..1907939
Genome browser
AA seq
535 aa
AA seq
DB search
MARMQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEEL
DKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRN
VPVVDILAELPAPQPLLRLTTDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLL
EPQLPQISSASLTVDSRHLLYGNGLVDSLPQPENNENYQVSSQRFPFTINVNGPGATALA
WHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQC
IGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGI
NVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAID
DFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVE
TQEQAKYLRRHGVHILQGYLYAQPMPLCDFPKWLAGSQPPPARHNGHITPIMPLR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgcatgcaaaaagcacaacggatcattaaaacctatcgccgtaatcgaatgatt
gtttgtacgatttgcgcactcgttacgctcgcttcgaccctgagcgtgcgatttatttca
cagcgtaacttaaatcaacaacgggtagtacaattcgccaatcacgctgtagaggaatta
gataaagtactgcttcccctacaggcaggtagcgaagtcttgcttccgctgattggtctg
ccctgctctgtcgcccatttgccattacgtaaacaggcggcaaaactccaaactgtgcga
tccattggcctggtgcaagacggcacactttattgctccagcatttttggttatcgcaat
gtgcccgtcgtggacattctggctgaacttcctgcaccgcaaccacttttacgactgacg
accgaccgtgccctgataaaaggcagtccggttttgattcaatggacgcctgcagcgggc
agtagcaatgctggggtcatggagatgattaacatcgacttactgacggcaatgctcctt
gaaccacaactgccgcaaatcagtagcgccagcctgacggtggacagtcggcatttgctc
tatggtaatgggctggtagattcccttccgcaacctgaaaacaatgaaaactatcaggtt
tcttcgcaacgctttccttttaccattaacgttaatggtccgggggctacggcgctggca
tggcactatcttccaacacaattaccgctggcggtgctgctaagtttacttgtgggctat
atcgcctggctggcgaccgcttaccgaatgagtttttcccgcgaaatcaatctgggcctg
gcgcaacatgagttcgaattgttctgccagcctttgcttaatgcgcgcagccagcaatgt
attggcgtagagattttgctgcgctggaacaatccgcgtcagggctggatttcgccggat
gtgtttattcctatcgcggaagaacatcatttaattgtgccactgacccgctatgtgatg
gcagaaaccattcgtcagcgccatgttttcccgatgagtagtcagtttcatgttggcatt
aacgtcgcacccagccattttcgccgtggtgtgctgataaaagatctcaatcagtactgg
tttagcgctcacccgattcagcaactgatcctcgaaatcaccgaacgcgatgccttactg
gatgttgattatcggattgcccgcgagctacatcgtaaaaacgtcaaactggcgattgat
gacttcggcaccggcaatagttcattttcctggcttgaaacattacgtcctgacgtgctg
aaaattgataagtcatttaccgcagctataggttctgacgcggttaactcgacggtgacc
gatatcatcatcgcactggggcaaagactgaatattgaactggtggcggagggtgtggaa
acgcaagaacaggcgaaatatttgcgccgtcatggcgtccatattttgcaagggtatttg
tacgcacagccgatgccactatgtgattttcccaaatggctggcgggcagccaaccgccg
cccgcccggcataatggacatatcacccccattatgccgttacgttaa
DBGET
integrated database retrieval system
