Escherichia coli APEC O1 (APEC): APECO1_O1CoBM140
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Entry
APECO1_O1CoBM140 CDS
T00425
Symbol
iroC
Name
(GenBank) IroC
KO
K18895
ATP-binding cassette, subfamily B, salmochelin/enterobactin exporter
Organism
ecv
Escherichia coli APEC O1 (APEC)
Pathway
ecv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
APECO1_O1CoBM140 (iroC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecv02000
]
APECO1_O1CoBM140 (iroC)
Transporters [BR:
ecv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
APECO1_O1CoBM140 (iroC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
RsgA_GTPase
AAA_25
AAA_29
AAA_22
nSTAND1
AAA_21
AAA_16
MMR_HSR1
ABC_ATPase
NACHT
AAA_30
Dynamin_N
AAA_28
AAA_5
FtsK_SpoIIIE
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ABD51711
UniProt:
A0A0H2XJX4
LinkDB
All DBs
Position
pAPEC-O1-ColBM:complement(118171..121956)
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AA seq
1261 aa
AA seq
DB search
MIIICQHPSRSHASITMRDRSVLAFLRNDPASGSYFTDGGGLMPANHTPTPAQSWIVRLA
RVCWERKKLSVIVVVASVSTILLAALTPLLTRQAVNDALAGNPARLPWLACGLLLIAFFD
FIGNYVRRGYAGMLSLWVQHTLRGRVFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTL
LQMCPVPLAVFTYYIAGIAVMLWMSPAMTLIVVCVLVCLAITALRARRRVFAQTGLASDQ
LANLTEHIREVLAQISVVKSCVAEMRETHWLDRQSRQIVRVRIGAVISQAMPGATMLALP
VLGQIVLLCYGGWSVMHGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVF
ALIDTRSQMEDGTESINSQVVGLELENMSFDYHHGDRHILSNISFSLRAGETVAVVGASG
SGKSTLLMLLARFYDPCSGKIWLNTSEGRQNLRDIRLEALRRRVGIVFEDAFLFAGTVAE
NIAYGHPQATADDIRRAAAAAGASDFINALPKGFDSLLTERGTNLSGGQRQRIALARALI
TAPDVLILDDTTSAVDAVTEAEINTALGRYADEGHMLLVIARRRSTLQLASRVVVLDKGR
MVDTGTPAELEARCPAFRALMTGDSDFLATSHNSHNELWPAEPATQDDVTDTGDKGFVAR
MTRVPENAVQQALAGKGRKVTSLLKPVAWMFVIAALLIALDSAAGVGVLILLQHGIDSGV
ATGDMSIIGLCALLALCLVIVGWCSYSLQTVFAARAAESVQHSVRLRSFGHMLRLGLPWH
EKHADSRLTRMTVDVDSLARFLQNGLAGAATSLVTMFAIAATMFWLDPFLALTALSAVPV
AALATMIYRRLSTPAYAQARLEIGKVNSTLQEKVSGLRVVQSHGQQELEGARLRALSERF
RATRVRAQKYLAVYFPFLTFCTEASYAAVLLVGASQVAAGEMTAGVLAAFFLLLGQFYGP
VQQLSGIVDAWQQATASGKHIDELLATEGTEHLGSSSVLPVTGALHLDEVTFSYPDSHEP
ALNKLTLTIPEGMVVAVVGRSGAGKSTLIKLIAGLYFPTHGNIRIGVQMLDDASLTEYRR
QIGLVDQDVALFSSDIAENIRYSRPSATNEDVEIASQRAGLYEMVCNLPQGFRTPVNNGG
ADLPAGQRQLIALARAQLANAHILLLDEATSCLDRTSEERLMSSLTDVVHAGKHSALIVA
HRLTTAQRCDLIAVIDKGLLAEYGTHEQLLSAGGLYTRLWHDSVSSTALHRQHNMKEETP
G
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgataatcatatgccagcacccatccaggagtcatgcatccataacaatgcgggaccgg
agcgtgctggcttttttgcggaacgatccggccagtggatcgtattttacagacggagga
ggcttaatgcctgcgaatcacactcccacaccggctcagtcatggatagttcgcctagcg
cgcgtgtgctgggaacgtaagaaacttagtgtcatcgtggtggtagcgtcagtatcgact
attttgctggctgcgctgacgccactgctgacaagacaggctgtgaatgacgcactggcg
ggcaatccggcccgcctgccgtggctggcctgcgggttactgttgatcgctttttttgat
ttcatcggtaactatgtgcgccgtggttatgccgggatgctctcactctgggtgcagcat
accctcagaggacgggtattcgacagtattcagaaacttgacggcgcaggccaggatgcg
ctgcgcaccgggcaggtgatttcacggaccaacagcgatctgcagcaggtgcataccctg
ctgcagatgtgcccggtgccgctggcagtgttcacttattacattgccggcattgccgtg
atgctgtggatgtcccctgccatgacgcttatcgtcgtgtgcgtactggtatgcctggcg
atcaccgcgcttcgtgcgcgtcgtagggtcttcgcgcaaaccgggctggcctcggaccaa
ctggcgaatctcaccgaacatatacgcgaggtgctggcacagatctcagtggtaaaatcc
tgtgtggcagagatgcgtgaaacgcactggctcgataggcagtcgcggcagattgtgcgt
gtacgcatcggtgcggttatctcgcaggcgatgcctggggccaccatgctggcgctaccg
gtgctcgggcaaatcgtcctgctgtgctacggcgggtggtcggtcatgcacgggcggatc
gatctcggtaccttcgttgcattcgccagcttcctcgcgatgctgaccgggccaacccgc
gtactggcatcgtttctggttatcgcacagcgcactcaggcgtccgtggagcgggtgttt
gcactgatcgacacccgttcacagatggaggacgggacggagtcgattaacagtcaggtt
gtcggactggaactggagaatatgagctttgactaccaccatggcgacagacatatcctc
agcaatatctccttttccctgcgcgccggtgaaaccgtggcggtggtgggcgcatcgggt
tcaggaaaatcgaccctgttgatgctgctggcgcgtttttatgatccctgctccggaaag
atatggctcaacaccagcgaaggccgacaaaatcttcgcgatatcagactggaggcgctt
cgtcgccgggtaggcatcgtatttgaagatgcttttctgtttgccggtacggtggcggaa
aatatcgcctatggccaccctcaggcaacggcggacgacattcgccgtgcggcagctgct
gcaggagccagcgattttatcaacgccctgccgaaaggcttcgatagcctgttaaccgaa
cggggtacgaatctttccggcgggcagaggcagcgaatagcgctggcgcgggcgctcatt
actgcaccggacgtgttaatcctggatgataccacctcagcggttgatgctgttacggaa
gcggagattaataccgcgctgggtcgctatgctgacgaagggcatatgctgctggtgatt
gcccgacggcgttcaacacttcagctagccagccgggttgtggtgctggataagggccgt
atggtggataccggaaccccggcagaacttgaagcgcgctgtccggcgttccgcgcactg
atgaccggcgacagcgattttctggccacgtcccacaatagccacaacgaattgtggccg
gctgaaccagcgacacaagacgatgtaacggatacgggggataaaggttttgtcgcccgt
atgacccgcgtaccggaaaatgcagtacagcaggcgctggccggtaaaggtcgcaaagtc
acgtcactactgaagcctgtggcgtggatgttcgtcatcgccgctctgctgatcgcactc
gattctgcggcaggcgtaggggtactgatactgttgcagcacggcattgactccggtgtc
gccacaggcgatatgtcgatcatcggcctctgtgccctgctcgccctgtgcctagtcatt
gtgggctggtgcagttattctctgcagacggtcttcgccgccagagcggcggaatcagtt
cagcattcggtgcgcttgcgcagcttcggccatatgctgcgtcttggactcccctggcat
gaaaagcatgccgattcgcgtcttacccgcatgaccgttgatgtggactctctcgcccgc
tttctgcaaaacggccttgccggtgcggccaccagtctggtgacgatgttcgcaatcgcc
gccaccatgttctggctcgacccgttcctggcgctgacggcattaagcgcagtgccagtg
gccgcactggcaaccatgatttatcgccgcctcagtacccctgcttatgcacaggcacgg
ctggaaataggcaaagtcaacagcaccctgcaggaaaaagtctctggcctgcgtgtcgtg
caatcgcatggtcagcaggaactggagggcgcccggctgcgcgcgttatcggagcgtttc
cgcgcaacccgtgtgcgagcacaaaaataccttgcagtctattttccgttcctgacattc
tgcaccgaggcctcctatgccgctgttctgttagtgggagcttcgcaggtcgccgctgga
gaaatgactgccggggtactggcggctttcttcctgttgctggggcaattctatgggcca
gtgcagcagttatcagggattgtcgacgcctggcagcaggcgacagccagcggcaaacat
attgatgaactactggcgacagaaggcactgagcacctcgggtcctcttcggtcctccct
gtcaccggtgcactgcatcttgatgaggtcacgttcagttatcccgacagtcacgagcca
gctctgaacaaacttaccctgacgatcccagagggaatggttgtcgcggtcgtcggtcgc
agcggtgcgggtaagtcgacgctgattaagctgattgccgggttgtatttccccacgcac
ggcaacatcagaatcggtgtgcaaatgctcgatgatgcctcgctcactgagtatcgtcgc
cagattgggcttgtcgatcaggatgtagcactgtttagtagtgatattgcagaaaacatt
cgttattcacggccatccgccaccaatgaagacgttgaaattgcctcacagcgggcaggg
ctgtatgagatggtgtgcaatctgccgcagggattccggacaccggtgaataacggcgga
gccgatctgcccgcaggtcagcgccagttgattgcgctggcccgcgcgcaactggcgaat
gcccacatcctgctgctcgacgaagccacgtcatgtctggatcgcacatccgaagaacga
ctgatgtcatcgttaacagatgtcgtgcatgccgggaagcactcggcgctgattgttgca
catcgtctgaccaccgcgcaacgctgcgatctgattgccgttattgataaggggttactt
gcggaatacggaacccacgaacagctgttatctgcgggcggcctctatacccgcttatgg
catgacagcgtcagcagtactgcgctccatcgccagcacaacatgaaggaggaaaccccg
ggatag
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