Escherichia coli O139 H28 E24377A (ETEC): EcE24377A_0425
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Entry
EcE24377A_0425 CDS
T00590
Symbol
sbcD
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ecw
Escherichia coli O139:H28 E24377A (ETEC)
Brite
KEGG Orthology (KO) [BR:
ecw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecw03400
]
EcE24377A_0425 (sbcD)
DNA repair and recombination proteins [BR:
ecw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EcE24377A_0425 (sbcD)
Archaeal homologous recombinant proteins
EcE24377A_0425 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
MIP-T3_C
Motif
Other DBs
NCBI-ProteinID:
ABV17631
UniProt:
A7ZIE7
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Position
complement(448625..449827)
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AA seq
400 aa
AA seq
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MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR
TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG
TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQQYADACKLRGDQPLPII
ATGHLTTVGASKSDAVRGIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS
PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS
QEPPVWLDIEIITDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL
SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccttcacacctcagactggcatctcggccagaacttctacagtaaaagccgc
gaagctgaacatcaggcttttcttgactggctgctggaaacagcacaaacccatcaggtg
gatgcgattattgttgctggtgatgttttcgataccggctcgccgcccagttacgcccgc
acgttatacaaccgttttgttgtcaatttacagcaaactggctgtcatctggtggtactg
gcaggaaaccatgactcggtcgccacgctgaatgaatcgcgcgatatcatggcgttcctc
aatacgaccgtggtcgccagcgccggacatgcgccgcaaatcttgcctcgtcgcgacggg
acgccaggcgcagtgctgtgccccattccgtttttacgtccgcgtgacattattaccagc
caggcggggcttaacggtattgaaaaacagcagcatttactggcagcgattaccgattat
taccaacaacaatatgccgatgcctgcaaactgcgcggcgatcagcctctgcccatcatc
gccacgggacacttaacgaccgtgggtgccagtaaaagtgacgccgtgcgtggcatttat
attggcacgctggacgcgtttccagcacaaaactttccaccagccgactacatcgcgctc
gggcatattcaccgcgcacagattattggcggcatggaacatgttcgctattgcggctct
cccattccactgagttttgatgaatgcggaaagagtaaatatgtccatctggtgacattt
tcaaacggcaaattagagagcgtggaaaacctgaacgtaccggtaacgcaacccatggcg
gtgctgaaaggcgatctggcgtcgattaccgcacagctggaacagtggcgcgatgtatca
caggagccgcctgtctggctggatatcgaaatcattactgatgagtatctgcatgatatt
cagcgcaaaatccaggcattaaccgaatcattgcctgttgaagtattgctggtacgccgg
agtcgtgaacagcgcgagcgtgtgttagccagccaacagcgtgaaaccctcagcgaactc
agcgtcgaagaggtgttcaatcgccgtctggcactggaagaactggatgaatcgcagcag
caacgtctgcagcatcttttcaccacgacgttgcataccctcgccggagaacacgaagca
tga
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