Escherichia coli O139 H28 E24377A (ETEC): EcE24377A_0718
Help
Entry
EcE24377A_0718 CDS
T00590
Symbol
speF
Name
(GenBank) ornithine decarboxylase, inducible
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ecw
Escherichia coli O139:H28 E24377A (ETEC)
Pathway
ecw00330
Arginine and proline metabolism
ecw00480
Glutathione metabolism
ecw01100
Metabolic pathways
ecw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ecw00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
EcE24377A_0718 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
EcE24377A_0718 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
EcE24377A_0718 (speF)
Enzymes [BR:
ecw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
EcE24377A_0718 (speF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
ADAMTSL1
Motif
Other DBs
NCBI-ProteinID:
ABV20217
UniProt:
A7ZJ75
LinkDB
All DBs
Position
complement(739680..741887)
Genome browser
AA seq
735 aa
AA seq
DB search
MNKMSELKIAVSRSCPDFFSTHRACVNIDESNYIDVAAIILSVSDVERGKLDEIDATGYD
IPVFIATENEERVPAEYLPRISGVFEHCESRKEFYGRQLETAASHYETQLRPPFFRALVD
YVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEMLFRSDLCNADVAMGDLLIHEGAPC
IAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGA
TPVYLETARNPYGFIGGIDAHCFEESYLRELITEVAPQRAKEARPFRLAVIQLGTYDGTI
YNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQ
AGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPFYPLFAALDINAKMHEGVSG
RNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEH
WHSFEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLN
SILFLLTPAEDMAKLQQLVALLVRFEKLLESDAPLAEVLPSIYKQHEERYAGYTLRQLCQ
EMHDLYARHNVKQLQKEMFRKEHFPRVSMNPQEANYAYLRGEVELVRLPDAEGRIAAEGA
LPYPPGVLCVVPGEIWGGAVLRYFSALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVI
KPRDAQSTLLKGEKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaatgtcagaattaaaaattgccgttagtcgttcttgcccggattttttttcc
actcatcgtgcatgcgtgaatatagacgaaagtaattatattgacgttgccgccattatt
ttatcagtcagtgatgttgaacgtggaaaactcgatgaaatagacgctactggctatgac
attcctgtttttattgcaacggaaaatgaagaacgtgtacccgcagaatatctgccacgt
atttctggtgtcttcgaacattgcgaatcacgtaaagagttttatggacgtcagttagaa
accgctgccagccattatgaaacgcaactgcgcccgcccttcttccgcgcactggtcgat
tatgttaatcagggcaatagtgcttttgactgccctggtcatcaggggggtgagtttttc
cgtcgccatccggcaggcaatcagttcgtggaatactttggcgaaatgctcttccgctct
gacttgtgtaatgctgacgtagcaatgggcgatctgctgattcatgaaggtgcgccatgt
attgcacaacagcatgcggctaaagtctttaatgccgataaaacctatttcgttttaaac
ggtacttcatcttctaataaagtggtcttaaacgcattgctgacgccgggcgatctggtg
ttgtttgaccgcaataaccataaatctaaccaccacggtgcgttgctacaggctggcgcg
acaccggtttatctggaaaccgcacgtaacccgtatggctttatcggtggcattgatgcg
cactgttttgaagaaagttacctgcgtgagctgattacagaagttgcaccgcagcgggca
aaagaggctcgtcctttccgcctcgccgttattcagctaggcacttacgacggtacgatt
tataacgcccgtcaggtggtggataaaattggtcatctgtgtgactacatcctctttgac
tccgcatgggtcggctatgaacagtttattccgatgatggctgactgttcgccgctgttg
ctggatcttaatgagaacgatccgggtattctggttacgcaatccgtacataaacagcag
gctggtttttctcaaacttcacaaatccataaaaaagacagccacatcaaagggcaacag
cgttatgtaccgcacaaacgcatgaacaacgcctttatgatgcacgcctccaccagcccg
ttctatccgctgtttgccgcactggatatcaacgccaaaatgcatgaaggtgtcagcggt
cgtaatatgtggatggattgtgtggtaaatggcattaatgcccgcaaactgatcctcgat
aactgtcagcatattcgtccgttcgtacctgaactggtggatggtaaaccctggcagtcg
tatgaaacggcgcaaattgcggttgatctgcgcttcttccagtttgtaccaggggaacac
tggcattcttttgaaggctatgcagagaatcaatactttgtcgatccttgcaaactgttg
ctgacaaccccaggtattgatgcacgtaacggcgaatatgaagcgttcggtgtacccgcg
acgattcttgctaacttcctgcgcgaaaatggcgtagtgccggaaaaatgcgatcttaac
tccatcctcttcctgctgactccggcagaagatatggccaagcttcagcaacttgttgcc
ctgctggtacgcttcgaaaaactgcttgagtccgacgcgccattagcagaagtgctgcct
tccatctacaaacagcatgaagagcgctacgccggttataccctgcgtcagttgtgtcaa
gaaatgcatgatttgtatgcccgtcacaacgtgaaacaactgcaaaaagagatgttccgt
aaggaacacttcccacgcgtaagcatgaatccgcaagaagccaactacgcctatttacgc
ggtgaagtggagctggttcgtctgccggatgcagaaggccgtatcgctgccgaaggtgcg
cttccttatcctccgggtgtgctgtgtgttgttccgggtgaaatctggggtggtgctgtt
ttgcgttacttcagcgctctggaagaagggatcaacctgctgccaggttttgcaccggag
ctgcagggtgtctatatcgaagaacatgatggtcgtaagcaagtttggtgctatgtcatc
aagcctcgtgatgcgcaaagcaccctgttgaaaggggaaaaattatga
DBGET
integrated database retrieval system
