Escherichia coli O139 H28 E24377A (ETEC): EcE24377A_1296
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Entry
EcE24377A_1296 CDS
T00590
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
ecw
Escherichia coli O139:H28 E24377A (ETEC)
Pathway
ecw04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ecw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
EcE24377A_1296 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecw03016
]
EcE24377A_1296 (trmU)
Enzymes [BR:
ecw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
EcE24377A_1296 (trmU)
Transfer RNA biogenesis [BR:
ecw03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
EcE24377A_1296 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
DUF7411
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ABV18441
UniProt:
A7ZKS3
LinkDB
All DBs
Position
complement(1298539..1299645)
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AA seq
368 aa
AA seq
DB search
MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA
VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG
ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK
IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL
GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF
TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII
EQRLPLPV
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaccgcaaaaaaagtaatcgtcggcatgtccggcggtgtcgattcctccgtt
tctgcctggctgttgcaacaacagggatatcaggttgaaggcctgtttatgaagaactgg
gaagaagacgacggtgaggaatattgcacagcggcagcggatctggctgatgcccaggct
gtctgcgacaagctcggcattgaactgcacaccgttaactttgctgccgagtactgggac
aacgtcttcgaactgttccttgccgaatataaagccggtcgcacgccgaatccggatatt
ctgtgcaacaaagagatcaaatttaaagccttcctcgaatttgccgccgaagatttaggt
gccgattatatcgctaccggtcattacgtacgtcgggccgatgtcgatggcaagagccgc
ctgctgcgtggtctggacagcaataaagaccagagctacttcctttatacgctcagccat
gagcagattgcgcaaagcctgttcccggtcggcgaactggaaaaaccgcaggtgcgtaag
attgctgaagatcttggtctggtcaccgcgaagaaaaaagactctaccggcatttgcttc
attggcgaacgtaaattccgcgagttcctgggccgttatctcccggcgcaaccgggcaaa
atcattaccgtcgatggcgatgaaattggtgagcaccaggggctgatgtatcacactctc
ggtcagcgtaaaggtctgggtatcggtggcaccaaagaaggtaccgaagaaccgtggtat
gtggtggacaaagacgtcgaaaacaacattctggttgtcgctcagggccatgaacacccg
cggctgatgtctgtcgggttgattgcccagcagttgcactgggtcgatcgcgaaccattc
accggcactatgcgttgcacggtaaaaacccgctatcgccagaccgatatcccttgcacc
gtcaaggcgctggacgatgatcgcattgaagtgattttcgatgaaccggttgccgccgtg
acgccgggccagtctgccgtcttctataacggtgaagtgtgcctcggtggcggtattatt
gagcagcgtctgccgctgccggtctga
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