Escherichia coli O139 H28 E24377A (ETEC): EcE24377A_2853
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Entry
EcE24377A_2853 CDS
T00590
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ecw
Escherichia coli O139:H28 E24377A (ETEC)
Pathway
ecw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EcE24377A_2853 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecw03019
]
EcE24377A_2853 (rnc)
03009 Ribosome biogenesis [BR:
ecw03009
]
EcE24377A_2853 (rnc)
03036 Chromosome and associated proteins [BR:
ecw03036
]
EcE24377A_2853 (rnc)
Enzymes [BR:
ecw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EcE24377A_2853 (rnc)
Messenger RNA biogenesis [BR:
ecw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EcE24377A_2853 (rnc)
Ribosome biogenesis [BR:
ecw03009
]
Eukaryotic type
90S particles
RNase
EcE24377A_2853 (rnc)
Prokaryotic type
rRNA processing factors
EcE24377A_2853 (rnc)
Chromosome and associated proteins [BR:
ecw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EcE24377A_2853 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ABV19127
UniProt:
A7ZQ11
LinkDB
All DBs
Position
complement(2853185..2853865)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gaactgttgcagcaggcattaactcatcgtagtgccagcagtaaacataacgagcgttta
gaatttttaggcgactctattctgagctacgttatcgccaatgcgctttatcaccgtttc
cctcgtgtggatgaaggcgatatgagccggatgcgcgccacgctggtccgtggcaatacg
ctggcagaactggcgcgcgaatttgagttaggcgagtgcttacgtttagggccaggtgaa
cttaaaagcggtggatttcgtcgtgagtcaattctcgccgacaccgtcgaagcattaatt
ggtggcgtattcctcgacagtgatattcaaaccgtcgagaaattaatcctcaactggtat
caaactcgtttggacgaaattagcccaggcgataaacaaaaagatccgaaaacgcgcttg
caagaatatttgcagggtcgccatctgccgctgccgacttatctggtagtccaggtacgt
ggcgaagcgcacgatcaggaatttactatccactgccaggtcagcggcctgagtgaaccg
gtggttggcacaggttcaagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga
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