KEGG   Escherichia coli O139 H28 E24377A (ETEC): EcE24377A_3003
Entry
EcE24377A_3003    CDS       T00590                                 
Name
(GenBank) helix-turn-helix DNA-binding domain protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
ecw  Escherichia coli O139:H28 E24377A (ETEC)
Brite
KEGG Orthology (KO) [BR:ecw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecw03000]
    EcE24377A_3003
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecw02048]
    EcE24377A_3003
Transcription factors [BR:ecw03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    EcE24377A_3003
Prokaryotic defense system [BR:ecw02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    EcE24377A_3003
SSDB
Motif
Pfam: HTH_3 HTH_19 HTH_31 DUF7013 WHIM1
Other DBs
NCBI-ProteinID: ABV17002
UniProt: A7ZQE8
LinkDB
Position
complement(3004476..3004895)
AA seq 139 aa
MTANAARAVKATRELVNAVPFLGGSDSEDDYREALELVEYLIEEDDTNPLIDFLASRIAE
YENNNEKFAEFDKAVAAMPVGVALLRTLIDQHNLTYADLKNEIGSKSLVSQILSGQRSLT
ISHIKALSARFGVKPEWFL
NT seq 420 nt   +upstreamnt  +downstreamnt
atgactgctaatgctgcacgcgctgttaaagcaacaagagaactggtcaatgcagtcccc
tttctgggaggcagtgactcagaagatgattatcgtgaagcactggaactggtcgaatat
ttgattgaagaagatgacaccaatccacttatcgactttctggcgagccgcattgcagag
tatgaaaacaacaacgaaaagtttgcagagttcgacaaagccgttgcggcaatgccggtt
ggcgtggcgttacttcgcacgttgattgatcaacataatctgacctatgcggatttgaag
aacgaaatcggctctaaatccctggtcagtcagattttgtctggacaacgatccctgaca
atatcccacattaaggcactttcagcccgatttggcgttaagccggaatggtttctttga

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