Escherichia coli O139 H28 E24377A (ETEC): EcE24377A_3118
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Entry
EcE24377A_3118 CDS
T00590
Name
(GenBank) ThiF family protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
ecw
Escherichia coli O139:H28 E24377A (ETEC)
Brite
KEGG Orthology (KO) [BR:
ecw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecw03016
]
EcE24377A_3118
Transfer RNA biogenesis [BR:
ecw03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
EcE24377A_3118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
DAO
UDPG_MGDP_dh_N
Sacchrp_dh_NADP
3HCDH_N
NAD_binding_7
ELFV_dehydrog
ApbA
TrkA_N
NT5C
Motif
Other DBs
NCBI-ProteinID:
ABV20013
UniProt:
A7ZQQ7
LinkDB
All DBs
Position
complement(3125113..3125919)
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AA seq
268 aa
AA seq
DB search
MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLI
DMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSV
GYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAK
LRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGA
ATMVTATFGFVAVSHALKKMMAKAARQG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtaattagtgatgcatggcgtcagcgttttggtggcacagcgcgtctgtat
ggtgaaaaagcgttgcaactgtttgctgacgcgcatatttgtgtggttggtatcggtggt
gtcggttcctgggcggcggaagcgctggcgcgcacggggattggcgcaatcacgcttatc
gatatggatgatgtgtgcgtcaccaataccaatcggcaaattcacgctctgcgcgataac
gtcgggctggcaaaagcggaagtcatggcggagcgtattcgccagattaacccggagtgc
cgtgtaacggtggtggatgatttcgtgacgccggataacgtagcgcagtatatgagcgtg
ggttattcgtacgtgattgatgccattgatagtgtacggcccaaagcggcgctgattgct
tattgtcggcgcaataaaatcccgctggtcacgaccggtggcgcgggtgggcagattgac
ccgacgcagattcaggttaccgatctggcgaaaacgattcaggatccgctggcggcgaag
ttgcgcgagcgcctgaaaagcgattttggcgtagtgaaaaacagtaaaggtaagctcggc
gtcgattgcgtgttttctactgaagcgctggtgtacccgcagtcagacggtactgtgtgt
gcgatgaaagccacggcagaagggccgaagcggatggattgtgcatctggatttggcgcg
gcaacgatggtgaccgccacctttgggtttgttgcggtttctcatgcgctgaagaagatg
atggcgaaagcggcgcgtcagggttaa
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