Escherichia coli O139 H28 E24377A (ETEC): EcE24377A_3225
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Entry
EcE24377A_3225 CDS
T00590
Symbol
ygfZ
Name
(GenBank) tRNA-modifying protein ygfZ
KO
K06980
tRNA-modifying protein YgfZ
Organism
ecw
Escherichia coli O139:H28 E24377A (ETEC)
Brite
KEGG Orthology (KO) [BR:
ecw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecw03016
]
EcE24377A_3225 (ygfZ)
Transfer RNA biogenesis [BR:
ecw03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
EcE24377A_3225 (ygfZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgfZ_barrel
GCV_T
DUF6237
Sortase
Motif
Other DBs
NCBI-ProteinID:
ABV18133
UniProt:
A7ZR07
LinkDB
All DBs
Position
3244774..3245754
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AA seq
326 aa
AA seq
DB search
MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLA
AHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGV
AGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGE
AELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKF
RGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDM
EPDSIFRVRDDANTLHIEPLPYSLEE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacaccttttcctccccgtcagcctacggcttctgcccgtttaccgctgacg
ctgatgacgcttgatgactgggcgcttgccaccattactggcgcggacagcgaaaaatat
atgcagggtcaggtgacagcagatgtcagccagatggcagaagatcagcacctgctcgcc
gcccattgcgacgccaaaggtaaaatgtggagcaatttacgtctgttccgcgacggcgat
ggctttgcatggattgaacggcgcagcgtgcgtgaaccgcagctgactgaactgaaaaaa
tatgcggtattctctaaagtgaccatcgcgccagacgacgagcgtgtgctgcttggtgtt
gccggttttcaggcgcgcgccgcgctggcaaatctctttagcgaactgccttcgaaagaa
aaacaggtagtcaaagaaggcgcgaccactttgctatggtttgaacacccggcagaacgt
ttcctgatcgtaaccgatgaagctactgctaatatgctgaccgataaactgcgcggtgaa
gcggaactgaacaatagccaacagtggctggcattaaacattgaagcgggtttcccggtg
attgatgccgccaacagcgggcagtttatcccacaggcgaccaatctccaggcgctgggc
ggtatcagctttaagaaaggctgttataccggacaagagatggtggcgcgagcaaaattc
cgtggtgccaacaaacgcgcgctctggttgctggcaggtagcgccagccgactgccggaa
gctggtgaagacttagagctgaaaatgggcgagaactggcgtcgtaccggtacggtgctg
gctgcggtaaaactggaagatggtcaggtcgtggtacaggtcgtcatgaataacgatatg
gaaccggacagcatcttccgcgtacgcgacgatgcgaatacactgcatatcgagccgctg
ccgtattcgctcgaagagtaa
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