Escherichia coli O139 H28 E24377A (ETEC): EcE24377A_4407
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Entry
EcE24377A_4407 CDS
T00590
Name
(GenBank) transcriptional regulator, DeoR/GntR family
KO
K27243
DeoR family transcriptional regulator, sulfoquinovose operon repressor
Organism
ecw
Escherichia coli O139:H28 E24377A (ETEC)
Brite
KEGG Orthology (KO) [BR:
ecw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecw03000
]
EcE24377A_4407
Transcription factors [BR:
ecw03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
EcE24377A_4407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
MarR
MarR_2
HTH_Crp_2
HTH_20
GntR
HTH_29
HTH_24
HTH_Mga
HTH_5
Fe_dep_repress
Rrf2
TrmB
DDRGK
HTH_27
SgrR_N
RPA_C
TFIIE_alpha
HTH_28
CoA_trans
HTH_17
HTH_36
MerR
HTH_12
Sugar-bind
HTH_PafC
YfeC-like
HTH_IclR
HTH_71
Replic_Relax
CggR_N
Sigma70_r4
PaaX
DnaD_N
Mga
Motif
Other DBs
NCBI-ProteinID:
ABV20704
UniProt:
A7ZU89
LinkDB
All DBs
Position
4399732..4400517
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AA seq
261 aa
AA seq
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MSLTELTGNPRHDQLLMLIAERGYMNIDELANLLDVSTQTVRRDIRKLSEQGLITRHHGG
AGRASSVVNTAFEQREVSQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNHNH
LRIITNNLRVAHILYHNPRFEVMVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAI
ESDGALMEFDVNEANVVKTMMAHARNILLVADHTKYHASAAVEIGNVAQVTALFTDELPP
AALKSRLQDSQIEIILPQEDA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaccgaactaaccggtaacccgcggcacgaccaactcctcatgctgatcgcc
gagcgtgggtatatgaatattgatgagctggcaaatctgctggatgtctccacgcagacg
gtccgccgggatattcgtaaattaagcgagcaaggcctgattacgcgccatcacggtggc
gcgggtcgggcttccagcgtcgttaatacggcgttcgagcagcgtgaggtttcgcaaacc
gaggaaaaaaaagcgattgccgaagcggtggcagactatattcctgatggttcaacaata
tttatcaccattggtacgactgttgagcatgttgcccgggcgttacttaaccataatcat
ttgcggataatcaccaacaacctgcgtgtggcgcatattctttaccacaacccgcgcttt
gaagtgatggtgcccggcggtacgttgcgctctcataatagcgggatcattggcccttca
gcggcgtcctttgtggctgattttcgtgctgattatctggtaacaagcgttggggcgatt
gagagcgatggcgcgttgatggagtttgatgtaaacgaagctaacgtggtgaaaacgatg
atggcgcacgcgagaaatattctgctggtcgccgatcacactaagtatcatgcttcggcg
gcggttgaaattggtaacgtggcacaggtcactgcgctctttaccgacgagctgccgccc
gctgcgctaaaatcacgcttacaagacagccaaattgaaatcattcttccccaggaagac
gcgtag
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