Escherichia coli O9 HS (commensal): EcHS_A1066
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Entry
EcHS_A1066 CDS
T00591
Symbol
ompA
Name
(GenBank) outer membrane protein A
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ecx
Escherichia coli O9 HS (commensal)
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecx02000
]
EcHS_A1066 (ompA)
Transporters [BR:
ecx02000
]
Other transporters
Pores ion channels [TC:
1
]
EcHS_A1066 (ompA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF2490
Motif
Other DBs
NCBI-ProteinID:
ABV05413
LinkDB
All DBs
Position
complement(1080627..1081667)
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AA seq
346 aa
AA seq
DB search
MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFINNNGPTHENQLGAGA
FGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGG
MVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDN
GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ
LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM
GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacagctatcgcgattgcagtggcactggctggtttcgctaccgtagcgcag
gccgctccgaaagataacacctggtacactggtgctaaactgggctggtcccagtaccat
gacactggtttcatcaacaacaatggcccgacccatgaaaaccaactgggcgctggtgct
tttggtggttaccaggttaacccgtatgttggctttgaaatgggttacgactggttaggt
cgtatgccgtacaaaggcagcgttgaaaacggtgcatacaaagctcagggcgttcaactg
accgctaaactgggttacccaatcactgacgacctagacatctacactcgtctgggtggt
atggtatggcgtgcagacactaaatccaacgtttatggtaaaaaccacgacaccggcgtt
tctccggtcttcgctggcggtgttgagtacgcgatcactcctgaaatcgctacccgtctg
gaataccagtggaccaacaacatcggtgacgcacacaccatcggcactcgtccggacaac
ggcatgctgagcctgggtgtttcctaccgtttcggtcagggcgaagcagctccagtagtt
gctccggctccagctccggcaccggaagtacagaccaagcacttcactctgaagtctgac
gttctgttcaacttcaacaaagcaaccctgaaaccggaaggtcaggctgctctggatcag
ctgtacagccagctgagcaacctggatccgaaagacggttccgtagttgttctgggttac
accgaccgcatcggttctgacgcttacaaccagggtctgtccgagcgccgtgctcagtct
gttgttgattacctgatctccaaaggtatcccggcagacaagatctccgcacgtggtatg
ggcgaatccaacccggttactggcaacacctgtgacaacgtgaaacagcgtgctgcactg
atcgactgcctggctccggatcgtcgcgtagagatcgaagttaaaggtatcaaagacgtt
gtaactcagccgcaggcttaa
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