Escherichia coli O9 HS (commensal): EcHS_A1234
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Entry
EcHS_A1234 CDS
T00591
Name
(GenBank) transcriptional regulator, TetR family
KO
K22041
TetR/AcrR family transcriptional regulator, copper-responsive repressor
Organism
ecx
Escherichia coli O9 HS (commensal)
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecx03000
]
EcHS_A1234
Transcription factors [BR:
ecx03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
EcHS_A1234
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
TetR_C_11
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
ABV05573
LinkDB
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Position
complement(1231905..1232615)
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AA seq
236 aa
AA seq
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MGSGLVNGGDYFYNNLSFTVTRYNGIMATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQ
HGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVE
SALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQ
RQARGEIPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgggatctggactggtgaacggaggtgattatttttataataacctttcattcacagtc
accaggtacaacggcatcatggcaactgactcaacacaatgtgtaaaaaaaagccgtggc
cgcccaaaagtgttcgacagggatgccgcgcttgataaggccatgaaattgttctggcaa
cacggttatgaagcgacttctcttgcggacctcgtcgaagcgaccggagccaaagcgccc
acgctatacgcggaatttaccaacaaagaggggttatttcgtgccgttctcgaccgctat
atcgatcgttttgccgctaagcatgaagcacagctgttttgtgaagagaaaagcgtggag
tctgcgctggctgactattttgctgccatcgccaactgctttaccagcaaagacaccccg
gcaggctgcttcatgatcaacaactgcaccaccctctccccagattcaggagatatcgcc
aatacgttgaaatcacgccatgcgatgcaagagcgcactttgcagcagtttttatgtcaa
cgacaagcgcgcggggaaatcccgacccactgtgacgtgacacatctggcagaattcctt
aattgtattattcaggggatgtcgatcagcgcacgcgaaggtgcatcgctggaaaaacta
atgcagattgccggaacgactttgcgtttatggcccgaactggtgaaataa
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