Escherichia coli O9 HS (commensal): EcHS_A1356
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Entry
EcHS_A1356 CDS
T00591
Symbol
oppF
Name
(GenBank) oligopeptide ABC transporter, ATP-binding protein OppF
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
ecx
Escherichia coli O9 HS (commensal)
Pathway
ecx01501
beta-Lactam resistance
ecx02010
ABC transporters
ecx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EcHS_A1356 (oppF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EcHS_A1356 (oppF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EcHS_A1356 (oppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecx02000
]
EcHS_A1356 (oppF)
Transporters [BR:
ecx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
EcHS_A1356 (oppF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
nSTAND1
NACHT
PRK
AAA_29
RsgA_GTPase
NB-ARC
MobB
DUF5906
DUF87
Sigma54_activat
ATP-synt_ab
RNA_helicase
AAA
AAA_13
AAA_16
ATPase
Motif
Other DBs
NCBI-ProteinID:
ABV05687
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All DBs
Position
1352821..1353825
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AA seq
334 aa
AA seq
DB search
MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESG
CGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSDIQMIFQDPLASLNPRMTI
GEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALI
LEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL
GHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLEKNKTIQLLEGELPSPINPPSGCVF
RTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgtaactgaaggaagaaaagtcctccttgaaatcgccgatcttaaagtgcac
tttgaaatcaaagatggcaaacagtggttctggcaaccgccgaaaacgctcaaagccgtc
gatggtgtcactcttcgcctgtatgaaggggaaacattaggtgtggtaggggaatcggga
tgcggtaagtccacctttgctcgcgccatcatcggtttggtcaaggcgaccgacggtcat
gttgcctggttaggtaaagagttgctgggcatgaagcccgatgaatggcgtgccgttcgc
agtgatattcagatgattttccaggatccgttggcatcgctaaacccgcgtatgaccatc
ggcgagatcatcgctgaaccactgcgtacttatcatccgaaaatgtcacgccaggaagtt
cgcgagcgcgtgaaggcgatgatgctgaaagtcgggttattgcctaacctgattaaccgc
tatccgcatgagttctccggtgggcagtgccagcgtatcgggattgctcgtgctcttatt
cttgaaccgaagctgattatctgcgatgagccggtgtcggcgctggacgtgtcaattcag
gcgcaggtggtcaacctgctccagcagctgcaacgtgagatgggattgtcattaattttt
atcgctcatgacctggccgtggtaaaacacatttccgatcgtgtgttggtgatgtatctc
ggccatgcggtagaactggggacctatgatgaggtctaccacaatccactacatccttac
accagggcattgatgtcggcagtccccatacctgatccggatctggagaagaacaaaacc
atccagttactggaaggggaattaccgtcgccgatcaacccgccttccggttgtgttttc
cgtacccgttgcccgattgccggtccggagtgcgccaaaacacgtcctgttctggagggg
agtttcagacacgccgtttcttgcctgaaagtcgatccgctttaa
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