Escherichia coli O9 HS (commensal): EcHS_A1525
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Entry
EcHS_A1525 CDS
T00591
Symbol
ydcT
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ecx
Escherichia coli O9 HS (commensal)
Pathway
ecx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EcHS_A1525 (ydcT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecx02000
]
EcHS_A1525 (ydcT)
Transporters [BR:
ecx02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
EcHS_A1525 (ydcT)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
ABC_ATPase
nSTAND_NTPase5
AAA_29
TOBE
Motif
Other DBs
NCBI-ProteinID:
ABV05853
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Position
1533247..1534260
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AA seq
337 aa
AA seq
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MTYAVEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGA
ISIFGKPASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALE
KVALGFVHQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKL
QQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGTSNV
FDPLMAENLCGMTGSFALRPEHIRLNIPGEMQANGTIQAVQYQGAATRFELTLSGGEKLL
VSQANMTGEELPATLTPGQQVMVSWSRDVMVPLVEER
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacgcagtggagtttgacaacgtctcgcggttgtacggtgacgtgcgcgcagta
gatggcgtcagtattgcgataaaagatggtgagttcttctctatgctggggccgtccggc
tccggcaaaaccacctgcctgcgcctgattgctggcttcgaacagctttccggcggggct
atctctatctttggtaaacccgccagcaatctgccaccgtgggagcgggacgtgaatact
gtctttcaggactacgcgctatttccgcatatgtcgattcttgacaatgtcgcctatggg
ctgatggtcaaaggcgtgaataaaaagcagcggcacgcaatggcgcaagaggcgctggag
aaagtggcgttggggtttgtacatcaacgtaaaccgtcacaactttctggtggtcagcgc
cagcgggttgctatcgccagagcattggtgaatgaaccgcgcgtattgctgttggatgaa
ccgctcggcgcactggatctcaaattgcgtgagcagatgcagctggaactgaaaaaactg
caacagtctctcggtatcacttttatcttcgttacccacgatcagggcgaagcgttatcg
atgtccgatcgtgtggcggttttcaataatggacgcattgagcaggtcgattccccgcgc
gatctctatatgcgcccgcgcacgccgtttgttgccggattcgtcgggacatccaacgtt
tttgatccgctaatggccgagaatctttgcggcatgacgggaagcttcgccctgcgaccg
gaacatatccgtctcaatatccccggcgaaatgcaggctaatggcacgatccaggcggtg
caatatcagggcgcagcgacccgttttgaactgacactgagcggcggtgaaaaactgctg
gtgagtcaggccaatatgacaggcgaagaactgcctgccacgctcacgcccggacaacag
gtgatggtttcctggtcgcgtgatgtgatggtgccgctggttgaggagaggtga
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