Escherichia coli O9 HS (commensal): EcHS_A2062
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Entry
EcHS_A2062 CDS
T00591
Symbol
vsr
Name
(GenBank) very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ecx
Escherichia coli O9 HS (commensal)
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecx03400
]
EcHS_A2062 (vsr)
DNA repair and recombination proteins [BR:
ecx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
EcHS_A2062 (vsr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
ABV06364
UniProt:
A0A7I6H4G9
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Position
complement(2050255..2050725)
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AA seq
156 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV
IFTHGCFWHHHHCYLFKVPATRTEFWLEKISKNVERDRRDISRLQELGWRVLIVWECALR
GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttcacgataaggccactcgcagcaaaaatatgcgcgcgattgccacgcgt
gatacggcgatagagaagcgcctcgccagtctgttaaccgggcagggcctggcatttcgc
gttcaggacgccagtctgcccggacgtccggattttgtcgttgatgaatatcgttgcgtg
atatttacccacggctgcttctggcaccatcatcactgctatctgtttaaagtgcctgcg
actcgaaccgagttctggctggagaagataagtaaaaatgttgaacgcgatcgccgcgat
atcagtcgtttgcaggaactcggctggcgcgtattgattgtctgggagtgtgcattacgt
gggcgcgagaagctgacggatgaagcgcttaccgagcgtctggaagagtggatctgcggc
gaaggtgccagcgcgcagatcgacacgcaggggattcatttactcgcttga
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